CF504537

Overview
NameCF504537
Unique NameCF504537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length484
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.886e-18
Identity = 45/123 (36.59%), Postives = 79/123 (64.23%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 361
            K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + +  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  214 KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.085e-17
Identity = 46/118 (38.98%), Postives = 76/118 (64.41%), Query Frame = 2
Query:   14 FDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP-NDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKG 364
            +D+PHVI D+  Y  +  V GDM++ IP+ DAI+MK +LH++DD+ CI+IL+ C +A+P   GKV++++  L  V      ++    LD   ++    G+ERT++E+  L  +AG+KG
Sbjct:  214 YDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMMLN-TGGKERTEEEWKKLIHDAGYKG 329          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.136e-16
Identity = 41/117 (35.04%), Postives = 71/117 (60.68%), Query Frame = 2
Query:   17 DVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP---NDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 358
            D+ HV+  A ++  ++ + GDM++ IP  DA+L+K +LH++D ++C+KIL+NC KA+P     GKV++IN  +   P   +      I D    I   +G ER ++E++ +  EAG+
Sbjct:  231 DLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDV--YIMFINGMERDEQEWSKIFSEAGY 345          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.760e-16
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 2
Query:   17 DVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 361
            D+PHV+    S   + ++GGDM+Q IP  DAIL+K ++H++DD   +KIL+ C  A+   GKV++I+  +    D  E   D    D   +    + +ERT  E+  L  +AGFK
Sbjct:  226 DLPHVVAGLESTDNLNYIGGDMFQSIPSADAILLKSIIHDWDDVEGLKILKKCKDAVVMGGKVIIIDVVVGVNHDIDEVLEDQLHFDMAMMCYF-NAKERTMSEWEKLIYDAGFK 339          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.494e-15
Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 2
Query:   17 DVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 358
            D+PHV+    S   + ++GGDM+Q IP  DAIL+K+++H++DDE  +KIL+ C  A+   GKV++I+  +    D  E   D    D + ++   + +ERT  E+  L   AGF
Sbjct:  225 DLPHVVAGLESTDKLSYIGGDMFQSIPSADAILLKFIIHDWDDEEGLKILKRCKDAVGIGGKVIIIDVVVGVNHDVDEVLEDQLHFD-MAMMSYFNAKERTMNEWEKLISAAGF 337          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: OMT12_DICDI (O-methyltransferase 12 OS=Dictyostelium discoideum GN=omt12 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.158e-14
Identity = 41/125 (32.80%), Postives = 74/125 (59.20%), Query Frame = 2
Query:    5 GINFDVPHVIKDASS------YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 361
            GINFD+ ++I  ++S      +P ++HV GD +  +PE D  ++K++LH++ DE CI IL N +K+L  +GK+ + +  L    D +  ++++   D I ++Q    +ER+  E+  L  + GFK
Sbjct:  200 GINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVL----DPSNYTKEAVFKD-ILMMQYFDAKERSINEWHQLFEKCGFK 319          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.199e-14
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 2
Query:   17 DVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPN-DGKVLVINSTL--PEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 358
            D+ HVI+     P +++V GDM+  IP  DAIL+K  LHN++D++CIKIL    +ALP+  GKV+++   +    +P  T A R S  +D + +     G+ERTKKE+  L  +A F
Sbjct:  221 DLNHVIERVIKNPKLDYVAGDMFTSIPNADAILLKSTLHNYEDDDCIKILNIAKEALPSTGGKVILVEIVVDTENLPLFTSA-RLSMGMDMMLM----SGKERTKKEWEDLLRKANF 332          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 41/136 (30.15%), Postives = 75/136 (55.15%), Query Frame = 2
Query:    5 GINFDVPHVIKDASS---YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVM 403
            GINFD   VI  ++    +P ++HV GD ++ +PE D  LMK +L  F DE C ++L+   K++ ++ K+++++  L    DS++       LD I +++   G++R+  E+  L   +GFK   +E    N  ++
Sbjct:  198 GINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIIL----DSSKYLNFDTYLD-ILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLII 328          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: OMT4_DICDI (O-methyltransferase 4 OS=Dictyostelium discoideum GN=omt4 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12
Identity = 38/122 (31.15%), Postives = 67/122 (54.92%), Query Frame = 2
Query:    5 GINFDVPHVIKDASSY---PGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 361
            GINFD+      A      P +EH  G+ ++ +PEGD  ++K +LH++ DE+CIKIL    K++   GKV++ +  +    +    ++    LD + +       E+T K+F+ ++ +AGFK
Sbjct:  203 GINFDLESFFNGAGELIKNPRLEHKSGNFFESVPEGDCYILKRILHDWKDEDCIKILETIGKSILPGGKVIIFDCII----NPKNYNKGHLYLD-VMMFHFFGSEEKTIKQFSNISDKAGFK 319          
The following BLAST results are available for this feature:
BLAST of CF504537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
7OMT8_MEDSA1.886e-1836.59Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
6OMT_COPJA2.085e-1738.98(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
ZRP4_MAIZE5.136e-1635.04O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
EOMT1_OCIBA8.760e-1636.52Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
CVMT1_OCIBA1.494e-1536.84Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
OMT12_DICDI2.158e-1432.80O-methyltransferase 12 OS=Dictyostelium discoideum... [more]
COOMT_COPJA8.199e-1440.17Columbamine O-methyltransferase OS=Coptis japonica... [more]
OMT11_DICDI4.499e-1230.15Probable inactive O-methyltransferase 11 OS=Dictyo... [more]
OMT4_DICDI7.674e-1231.15O-methyltransferase 4 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-026 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504537 ID=CF504537; Name=CF504537; organism=Citrus sinensis; type=EST; length=484bp
TAAGGGTATTAATTTTGACGTACCTCATGTTATAAAAGATGCCTCATCTT
ATCCCGGCATGGAACATGTTGGCGGAGATATGTACCAAAAAATTCCAGAG
GGGGATGCCATTTTAATGAAGTGGATGCTTCATAATTTTGATGATGAGAA
TTGCATAAAGATACTGAGGAATTGTTACAAAGCTCTTCCAAATGATGGAA
AGGTACTTGTTATTAACTCAACGTTGCCAGAAGTGCCTGACAGTACCGAG
GCTTCAAGGGATTCCTTCATTTTAGATGCAATTTTTTTAATCCAAATTCC
TCATGGAAGGGAGCGGACCAAAAAGGAGTTCACTGCATTGGCAATCGAAG
CTGGATTTAAGGGTATCAACTTTGAATGTAACGTTTGCAATTCCTATGTC
ATGGAATTCTACAAGTAACTTTGAAGCTAGATTGCTTCATTCTTTCTTTA
TCAGAAAGATGCATCTTCTCAATTTTAATTTGGA
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