CF504548

Overview
NameCF504548
Unique NameCF504548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length399
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.605e-19
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 1
Query:   46 VVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +++I      + + L   +YD+ CP A   ++ +V   +     + A L+R+HFHDCFV+GCD SIL++ TS+    +   P N +VRGF+ ID++K  ++  C   +VSCADI+ +A
Sbjct:   11 ILVIQGLVTFSEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCP-GIVSCADIITLA 127          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.140e-18
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 1
Query:   52 LILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            L    A +A + L   +Y + CP A   +  +V      +  + A+ LR+ FHDCFV+GCDAS+L+D      SEK+  P N SVRG+E+ID+ K++++  C R  VSCADI+ +A
Sbjct:   10 LFCFLAPSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGP-NASVRGYEIIDEAKRQLEAACPR-TVSCADIVTLA 123          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.650e-18
Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:  100 YYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +Y   C  A   +K  V     ++  +   L+R+HFHDCFV+GCD S+L+D T +  +EK++  NN S+RGFEVID  K  ++ VCK  VVSCADI+A A
Sbjct:   65 FYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCK-GVVSCADIVAFA 163          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.650e-18
Identity = 46/128 (35.94%), Postives = 79/128 (61.72%), Query Frame = 1
Query:   22 MAYRGIFHVVLILAFAATAFST---LSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAV 396
            MA + I  +V++L+    + +    L   YY   CP+A   ++ +    V ++  + A LLR+HFHDCFV+GCD S+LL      D+E++A+P N +++G+EV+D  K  +++ C   ++SCAD+LA+
Sbjct:    1 MAIKNILALVVLLSVVGVSVAIPQLLDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVP-NLTLKGYEVVDAAKTALERKCPN-LISCADVLAL 125          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.767e-18
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   28 YRGIFHVVLILAFAATAFSTL-SPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            Y  I  ++L+L       S L    YY   CP+A   ++  VE+  + +  +   LLRLHFHDCFVQGCD S+L+   S   +E+ A+P N  +RG EVID  K  ++ VC   VVSCADILA+A
Sbjct:    8 YCYIMIIMLVLVLGKEVRSQLLKNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALP-NLGLRGLEVIDDAKARLEAVCP-GVVSCADILALA 127          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.767e-18
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 1
Query:   46 VVLILAFAATAFST--LSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAV 396
            + L+LA AA   S+  L   +Y   CP     +++ +  A+     +   LLR+HFHDCFV+GCD S+LLD      +EK+A P N ++RGF  ++++K  V+K C    VSCAD+LA+
Sbjct:    8 LALLLAAAAVMASSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATP-NQTLRGFGFVERVKAAVEKACP-GTVSCADVLAL 124          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.225e-18
Identity = 47/100 (47.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  100 YYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +Y   CP A   ++  V A    + R+   +LR+HFHDCFVQGCD SIL+   +T   E+ A PN N ++GFEVID  K +++  C   VVSCADILA+A
Sbjct:   39 FYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACP-GVVSCADILALA 133          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.062e-17
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  100 YYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +Y + CP A   ++  V + V  +  + A +LR+HFHDCFVQGCD SIL+   +T   EK A   N  +RG+E+ID  K +++  C   VVSCADILA+A
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT---EKTAFA-NLGLRGYEIIDDAKTQLEAACP-GVVSCADILALA 130          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.387e-17
Identity = 48/121 (39.67%), Postives = 70/121 (57.85%), Query Frame = 1
Query:   37 IFHVVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            + H+++ L+   T+ + LS  +Y   C  A   ++  V +A   +  +   LLRL FHDCFVQGCDAS+L+   ST  S+    P N S+ GF VID  K  ++ +C    VSCADI+A+A
Sbjct:   12 LLHLLMFLSSLLTSSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSD----PGNASLGGFSVIDTAKNAIENLCP-ATVSCADIVALA 127          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.387e-17
Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 1
Query:  100 YYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTS-TIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +Y   CP A   +++IV   VE    +   LLR+H+HDCFV+GCDAS+LLD  +    SEK A P N S+ GFE+ID+IK  ++K C    VSCADIL +A
Sbjct:   50 FYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARP-NLSLSGFEIIDEIKYILEKRCPN-TVSCADILTLA 148          
The following BLAST results are available for this feature:
BLAST of CF504548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PER39_ARATH9.605e-1936.44Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER44_ARATH2.140e-1840.52Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER5_VITVI3.650e-1846.00Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER1_ARATH3.650e-1835.94Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER25_ARATH4.767e-1843.20Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER1_ORYSJ4.767e-1839.50Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER71_ARATH6.225e-1847.00Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER2_ARAHY1.062e-1745.00Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER46_ARATH1.387e-1739.67Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER24_ARATH1.387e-1748.51Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-037 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504548 ID=CF504548; Name=CF504548; organism=Citrus sinensis; type=EST; length=399bp
ACTAATTAGTGCAAATTAGTCATGGCTTATAGAGGCATATTTCATGTCGT
TCTCATTTTGGCTTTTGCAGCTACAGCTTTCTCAACCCTTTCTCCTTGCT
ACTATGATAAAGTTTGTCCCGAAGCTTTGCCAACAATCAAACGAATAGTT
GAAGCCGCTGTGGAAAAAGAAGGCCGCATGGGTGCTTCCTTACTTCGTCT
CCACTTCCATGATTGTTTTGTTCAAGGTTGTGATGCCTCCATTCTTCTTG
ATGACACGTCCACCATTGATAGTGAAAAGAATGCAATTCCAAATAATAAT
TCCGTTAGAGGATTCGAGGTCATCGACCAGATAAAGAAAGAGGTCGACAA
AGTTTGCAAACGCCCAGTTGTTTCTTGTGCAGATATCTTGGCTGTAGCA
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