CF504562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.476e-24 Identity = 48/78 (61.54%), Postives = 63/78 (80.77%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGE 309 ME+TF+M+KPDGVQR L+GEI++RFE+KG L G KLM V A +HY++ + KPFFG L+++ITSGPV AM+WEGE Sbjct: 1 MEKTFVMVKPDGVQRQLIGEILLRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGE 78
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.845e-24 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGE 309 ME+TF+M+KPDGVQR L+GEI+ RFE KG+ L G KLM V AE HY + +PFFG L+++ITSGPV AM+WEGE Sbjct: 1 MEKTFLMVKPDGVQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGE 78
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.302e-23 Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEG 312 +E+TF+ IKPDGVQRGL+ EI+ RFE KGF L GLK +T + AEKHY +PFF L+++ITSGPVVAM+WEGEG Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEG 81
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_THET8 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ndk PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEG 312 ME+TF+MIKPDGV+RGLVGEI+ RFE+KGF + LKLM + + AE+HY + KPFF L+ +ITSGPVVAM+ EG G Sbjct: 1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPG 79
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_THET2 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEG 312 ME+TF+MIKPDGV+RGLVGEI+ RFE+KGF + LKLM + + AE+HY + KPFF L+ +ITSGPVVAM+ EG G Sbjct: 1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMRISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPG 79
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23 Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 79 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEG 312 E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFF L+ +ITSGPVVAM+WEG+G Sbjct: 3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDG 80
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEG 312 +E+TF+ IKPDGVQRGL+ EI+ RFE KGF L GLK +T + AEKHY +PFF L+++ITSGPV+AM+WEGEG Sbjct: 3 LERTFVAIKPDGVQRGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEG 81
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.701e-23 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEG 312 ME+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK +T R A +HY +PFF L+++ITSGPV+AM+WEG+G Sbjct: 3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDG 81
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_GLOVI (Nucleoside diphosphate kinase OS=Gloeobacter violaceus GN=ndk PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.221e-23 Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEG 312 ME+TFI IKPDGVQRGLVGEI+ RFE++GF L GLKLM V A+KHY + +PFFG L+ +ITS PVVA++ EG+G Sbjct: 1 MERTFIAIKPDGVQRGLVGEILQRFERRGFKLVGLKLMQVSEALAQKHYAEHKERPFFGGLVAFITSSPVVAVVLEGKG 79
BLAST of CF504562 vs. ExPASy Swiss-Prot
Match: NDK_BACSK (Nucleoside diphosphate kinase OS=Bacillus clausii (strain KSM-K16) GN=ndk PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.221e-23 Identity = 45/79 (56.96%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 76 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEG 312 ME+T++M+KPDGVQR L+G I+ RFE+KG++L KL+T+ + AE HY + +PFFG L+ +ITSGPV AM+WEGEG Sbjct: 1 MERTYVMVKPDGVQRNLIGNIVSRFEQKGYTLAAAKLVTLSKETAETHYSEHRERPFFGELVSFITSGPVFAMVWEGEG 79 The following BLAST results are available for this feature:
BLAST of CF504562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504562 ID=CF504562; Name=CF504562; organism=Citrus sinensis; type=EST; length=312bpback to top |