CF504613

Overview
NameCF504613
Unique NameCF504613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length555
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_XANCB (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=betB PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.676e-21
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G++V A  G TF V +P T EV+ANV   DA+D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +
Sbjct:   11 IGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAG--QRHWAALTVVERSRILLRAVALLRE 81

HSP 2 Score: 58.5362 bits (140), Expect = 3.676e-21
Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  + LA LET N GKP  ++   ++     +L YY G A  + G+ VP        T HEP+GV G I  WN+P+
Sbjct:   81 ERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQGVQVPLREGSFFYTRHEPLGVVGAIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_XANC8 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=betB PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.676e-21
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G++V A  G TF V +P T EV+ANV   DA+D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +
Sbjct:   11 IGGRYVPARGGHTFEVVNPATGEVLANVHNADADDLDAAVDSAKAG--QRHWAALTVVERSRILLRAVALLRE 81

HSP 2 Score: 58.5362 bits (140), Expect = 3.676e-21
Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  + LA LET N GKP  ++   ++     +L YY G A  + G+ VP        T HEP+GV G I  WN+P+
Sbjct:   81 ERNDALAELETLNTGKPLSETRSVDIVTGADVLEYYAGVAQALQGVQVPLREGSFFYTRHEPLGVVGAIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 4.782e-21
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G +VDA SG+TF   DP T E +A+V +  A D++RAV +AR+   E  W  +T  +RSR++ RA +++ +
Sbjct:   11 IGGAYVDATSGETFDTLDPATGETLASVQQASAADVERAVQSAREGQRE--WAALTAMQRSRVLRRAVEILRE 81

HSP 2 Score: 57.3806 bits (137), Expect = 4.782e-21
Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  +ELAALET + GKP  ++L  ++     ++ YY G A  I G  +P      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDELAALETRDTGKPIAETLAVDIATGADVIEYYAGLATAIEGQQIPLRPTSFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.218e-21
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            +N+++L+A+E  +NGK ++ +   ++ + +  + +Y GWADK  G  +  D      + HEPIGV GQI+PWNFPLL
Sbjct:   98 KNIDDLSAIEALDNGKTFLWAKSVDLSLSISTIKHYAGWADKNFGQVIETDEKKLTYSRHEPIGVVGQIIPWNFPLL 174

HSP 2 Score: 46.9802 bits (110), Expect = 6.218e-21
Identity = 25/73 (34.25%), Postives = 38/73 (52.05%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            ING+FVD     T  V +P   ++I  ++E    DID AV  A KAF+       +  +R  ++ + A L+EK
Sbjct:   26 INGEFVDGVKNTTIDVVNPANGKLITKISEATEADIDIAVEAAHKAFETTWGLNCSGSKRGDMLYKLAQLMEK 98
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURPS (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.220e-21
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRE 81

HSP 2 Score: 50.8322 bits (120), Expect = 6.220e-21
Identity = 26/76 (34.21%), Postives = 38/76 (50.00%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  + LA LE  + GKP  ++   ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.220e-21
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRE 81

HSP 2 Score: 50.8322 bits (120), Expect = 6.220e-21
Identity = 26/76 (34.21%), Postives = 38/76 (50.00%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  + LA LE  + GKP  ++   ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.220e-21
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRE 81

HSP 2 Score: 50.8322 bits (120), Expect = 6.220e-21
Identity = 26/76 (34.21%), Postives = 38/76 (50.00%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  + LA LE  + GKP  ++   ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURMS (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.220e-21
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRE 81

HSP 2 Score: 50.8322 bits (120), Expect = 6.220e-21
Identity = 26/76 (34.21%), Postives = 38/76 (50.00%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  + LA LE  + GKP  ++   ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURMA (Betaine aldehyde dehydrogenase OS=Burkholderia mallei GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.220e-21
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRE 81

HSP 2 Score: 50.8322 bits (120), Expect = 6.220e-21
Identity = 26/76 (34.21%), Postives = 38/76 (50.00%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  + LA LE  + GKP  ++   ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURM9 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=betB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.220e-21
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRE 81

HSP 2 Score: 50.8322 bits (120), Expect = 6.220e-21
Identity = 26/76 (34.21%), Postives = 38/76 (50.00%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  + LA LE  + GKP  ++   ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNYPI 156
The following BLAST results are available for this feature:
BLAST of CF504613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
BETB_XANCB3.676e-2145.21Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_XANC83.676e-2145.21Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_BURXL4.782e-2141.10Betaine aldehyde dehydrogenase OS=Burkholderia xen... [more]
ALDH_AGABI6.218e-2140.26Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
BETB_BURPS6.220e-2147.95Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP16.220e-2147.95Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP06.220e-2147.95Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURMS6.220e-2147.95Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURMA6.220e-2147.95Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM96.220e-2147.95Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-102 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504613 ID=CF504613; Name=CF504613; organism=Citrus sinensis; type=EST; length=555bp
CTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCACAGC
TGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTACACCT
AAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAACATT
TCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTGAAG
GAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCATTT
GATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGATTAT
GTTGCGGGCTGCTGACTTGATTGAGAAAACATGGAGGAGCTGGCAGCTTT
GGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCTGAAG
TACCAATGGTGGTTCGCCTGTTGCACTATTATCTTGGATGGGCTGATAAA
ATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAACTTT
ACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTC
TTCTC
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