CF504637

Overview
NameCF504637
Unique NameCF504637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 4.525e-79
Identity = 140/155 (90.32%), Postives = 147/155 (94.84%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HV ATKLGA+LTEV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVWATKLGAKLTEV 155          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 4.525e-79
Identity = 141/155 (90.97%), Postives = 147/155 (94.84%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            M+TFL+TSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIV  TCR IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPEDIGAGDQGHMFGYATDET E MPLSHVLATKLGA+LTEV
Sbjct:    1 MDTFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVHKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEV 155          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 4.525e-79
Identity = 138/155 (89.03%), Postives = 149/155 (96.13%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            M+TFLFTSESVNEGHPDKLCDQ+SDA+LDACL+QDPESKVACE+CTKTNMVMVFGEITTKA+V+YEKIVRDTCR IGF S DVGLDADHCKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA+LTEV
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLKQDPESKVACESCTKTNMVMVFGEITTKAQVNYEKIVRDTCRGIGFTSPDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEV 155          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 5.910e-79
Identity = 142/155 (91.61%), Postives = 147/155 (94.84%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            M+TFLFTSESVNEGHPDKLCDQISDAVLDACL QD ESKVACETCTKTN+VMVFGEITTKA VDYEKI RDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEV
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMVFGEITTKANVDYEKIARDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEV 155          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 5.910e-79
Identity = 142/155 (91.61%), Postives = 147/155 (94.84%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            M+TFL TSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIVR TCR IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPEDIGAGDQGHMFGYATDET E MPLSHVLATKLGA+LTEV
Sbjct:    1 MDTFLNTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEV 155          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 7.718e-79
Identity = 142/154 (92.21%), Postives = 147/154 (95.45%), Query Frame = 1
Query:   91 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            ETFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQS DIAQGVHGHF+KRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEV
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSSDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEV 156          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.008e-78
Identity = 141/155 (90.97%), Postives = 147/155 (94.84%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            ++TFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH T+RPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEV
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEV 159          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.317e-78
Identity = 139/155 (89.68%), Postives = 148/155 (95.48%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            ME+FLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKA VDYE+IVR TCR IGFVS DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE++GAGDQGHMFGYATDET E MPL+HVLATKLGA+LTEV
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEV 155          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 2.246e-78
Identity = 138/155 (89.03%), Postives = 147/155 (94.84%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            M+TFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPESKVACETC+KTNMVMVFGEITTKA VDYEKIVRDTCR IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDET E MPL+HVLATKLGA+LTEV
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLAQDPESKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEV 155          
BLAST of CF504637 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 8.533e-78
Identity = 140/155 (90.32%), Postives = 146/155 (94.19%), Query Frame = 1
Query:   88 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEV 552
            ++TFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVR TCR IGFVS DVGLDAD+CKVLV IEQQSPDIAQGVHGH T+RPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEV
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEV 159          
The following BLAST results are available for this feature:
BLAST of CF504637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_TOBAC4.525e-7990.32S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_DAUCA4.525e-7990.97S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK1_ACTCH4.525e-7989.03S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK_MESCR5.910e-7991.61S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK2_DAUCA5.910e-7991.61S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK5_POPTR7.718e-7992.21S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK3_ATRNU1.008e-7890.97S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK4_ARATH1.317e-7889.68S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK4_POPTR2.246e-7889.03S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK4_ATRNU8.533e-7890.32S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-126 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504637 ID=CF504637; Name=CF504637; organism=Citrus sinensis; type=EST; length=552bp
ATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCTTAGA
TCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTC
TATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGAC
CAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGATCCTGAGAG
CAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTG
GAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGAC
ACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACGCCGA
TCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATTGCCC
AGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGT
GACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAATTTAT
GCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGG
TT
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