CF509456

Overview
NameCF509456
Unique NameCF509456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_PYRHO (NAD-dependent deacetylase OS=Pyrococcus horikoshii GN=npdA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.729e-15
Identity = 43/98 (43.88%), Postives = 49/98 (50.00%), Query Frame = 1
Query:  220 FRGPNGIWTLQR-EGKPLPEAS---------------LPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSC 465
            FRG +G+W   R E    PEA                    +A P   H ALVELEK GILK VI+QNVD LH  +G   + L ELHGN F   C SC
Sbjct:   32 FRGKDGLWKKYRPEELATPEAFERNPKLVWDFYKWRIKKILKAKPNPAHYALVELEKMGILKAVITQNVDDLHREAG--TKNLIELHGNIFRVRCTSC 127          

HSP 2 Score: 35.8094 bits (81), Expect = 3.729e-15
Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 3
Query:  135 QLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            ++A+++  SK+++ FTGAGIS   GIP F
Sbjct:    4 EVARVLASSKNVIAFTGAGISAESGIPTF 32          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_CALMQ (NAD-dependent deacetylase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=npdA PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 6.293e-15
Identity = 38/101 (37.62%), Postives = 50/101 (49.50%), Query Frame = 1
Query:  220 FRGPNGIWT-----------LQREGKPLPEASLPFHR----AMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEY 477
            FRGP G+W            L  + K   E  +   R    A P   H+AL ELEK GI+K+VI+QN+D LH  +G     + ELHGN     C  C ++Y
Sbjct:   40 FRGPQGLWRRFDPALASIDYLNTDPKGFWEFYIERFRVLNNARPNKAHLALAELEKLGIIKYVITQNIDNLHQSAG--SINVIELHGNYTTVYCMRCKTQY 138          

HSP 2 Score: 38.891 bits (89), Expect = 6.293e-15
Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 3
Query:  141 AKLIQKSKHLVVFTGAGISTSCGIPDF 221
            A ++  S+H + FTGAGIST  GIPDF
Sbjct:   14 AVILTSSRHAIAFTGAGISTESGIPDF 40          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_RHOPA (NAD-dependent deacetylase OS=Rhodopseudomonas palustris GN=npdA PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 6.295e-15
Identity = 34/109 (31.19%), Postives = 47/109 (43.12%), Query Frame = 1
Query:  220 FRGPNGIWTLQREGKPLP-------------------EASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDF 489
            FR P G+W+     +P+P                        F +A P   H AL  L KAG +  +I+QN+D LH  SG     + ELHGN+    C  CG  +  D+
Sbjct:   40 FRSPGGLWS---RNQPIPFDEFVARQDARDEAWRRRFAMEQTFAKARPARGHRALASLYKAGKVPAIITQNIDNLHQVSGFAEHDVVELHGNTTYARCIGCGKRHELDW 145          

HSP 2 Score: 41.2022 bits (95), Expect = 6.295e-15
Identity = 19/36 (52.78%), Postives = 24/36 (66.67%), Query Frame = 3
Query:  114 NLQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            +L   +EQL  +I  +  +V FTGAGIST  GIPDF
Sbjct:    5 SLSSGVEQLGDMIAHASSIVPFTGAGISTESGIPDF 40          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_SULTO (NAD-dependent deacetylase OS=Sulfolobus tokodaii GN=npdA PE=3 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 6.297e-15
Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 1
Query:  220 FRGPNGIW--------TLQREGKPLPEASLPFHR--------AMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKETSP 525
            FRGPNG+W        T++   K  P+    F+R        A+P   H AL ELEK G+++ +I+QN+DGLH  +G     + ELHGN     C +C   Y  D  ++ I  +   P
Sbjct:   33 FRGPNGLWKKYSPELATIEYFKKD-PKGFWEFYRLRMRGLFTALPNRAHYALAELEKMGLIRAIITQNIDGLHQLAG--SRNVIELHGNMRKCYCVNCLKTYDSDTVLDKIDKEGLPP 147          

HSP 2 Score: 36.1946 bits (82), Expect = 6.297e-15
Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 3
Query:  132 EQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            +++  L+  S + + FTGAGIST+ GIPDF
Sbjct:    4 DKVGDLLLTSTYAIAFTGAGISTASGIPDF 33          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_PYRAB (NAD-dependent deacetylase OS=Pyrococcus abyssi GN=npdA PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 8.182e-15
Identity = 46/119 (38.66%), Postives = 55/119 (46.22%), Query Frame = 1
Query:  220 FRGPNGIWTLQR-EGKPLPEASL---------------PFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCG-SEYFRDFEVETIGLKETSP 525
            FRG +G+W   R E    PEA                    +A P   H ALVELE  GIL+ VI+QNVD LH  +G     L ELHGN F   C  C   EY ++ +     LKE  P
Sbjct:   32 FRGKDGLWNKYRPEELATPEAFARNPKLVWEFYKWRINKILKAKPNPAHYALVELEDMGILRAVITQNVDDLHREAG--TRNLIELHGNIFRVKCTKCNFKEYLKESQRLEEVLKEDLP 148          

HSP 2 Score: 35.8094 bits (81), Expect = 8.182e-15
Identity = 18/40 (45.00%), Postives = 26/40 (65.00%), Query Frame = 3
Query:  129 IEQLAKLIQKSKHLVVFTGAGISTSCGIPDFSRSK---WN 239
            I ++A+++  SK+ + FTGAGIS   G+P F R K   WN
Sbjct:    2 IVEVARVLASSKNAIAFTGAGISAESGVPTF-RGKDGLWN 40          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_PYRKO (NAD-dependent deacetylase OS=Pyrococcus kodakaraensis GN=npdA PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.331e-14
Identity = 41/98 (41.84%), Postives = 48/98 (48.98%), Query Frame = 1
Query:  220 FRGPNGIW-TLQREGKPLPEA---------------SLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSC 465
            FRG NG+W T + E    PEA                    +A P   H AL ELE  G+LK VI+QNVD LH  +G    K+ ELHGN F   C SC
Sbjct:   32 FRGRNGLWKTYRAEELATPEAFKRDPHLVWEFYKWRMRKILKAEPNPAHKALAELENMGVLKAVITQNVDDLHREAG--SRKVVELHGNIFRVRCVSC 127          

HSP 2 Score: 33.8834 bits (76), Expect = 2.331e-14
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 3
Query:  141 AKLIQKSKHLVVFTGAGISTSCGIPDF 221
            AKL+ +++  + FTGAGIS   GIP F
Sbjct:    6 AKLLARARFAIAFTGAGISAESGIPTF 32          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_PYRFU (NAD-dependent deacetylase OS=Pyrococcus furiosus GN=npdA PE=3 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 3.031e-14
Identity = 43/106 (40.57%), Postives = 55/106 (51.89%), Query Frame = 1
Query:  220 FRGPNGIWTLQR-EGKPLPEASL-------PFHR--------AMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCG-SEYFRD 486
            FRG +G+W   R E    PEA          F++        A P   H+AL ELEK GI+K VI+QNVD LH  +G   + + ELHGN F   C SC   EY ++
Sbjct:   32 FRGKDGLWRKYRAEELATPEAFKRDPKLVWEFYKWRIKKILEAKPNPAHIALAELEKMGIIKAVITQNVDDLHREAG--SKNVIELHGNIFRVKCTSCSYREYLKE 135          

HSP 2 Score: 34.2686 bits (77), Expect = 3.031e-14
Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 3
Query:  135 QLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            +++K++ KS   + FTGAGIS   GIP F
Sbjct:    4 EVSKILAKSSMAIAFTGAGISAESGIPTF 32          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD2_ARCFU (NAD-dependent deacetylase 2 OS=Archaeoglobus fulgidus GN=npdA2 PE=1 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 5.114e-14
Identity = 37/110 (33.64%), Postives = 52/110 (47.27%), Query Frame = 1
Query:  220 FRGPNGIWT------------LQREGKPLPEASLPFHR---AMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSC-----GSEYFRDF 489
            FRG +G+W              +R  +   E S+       A P   H A+ ELE+ GI+K VI+QN+D LH R+G    ++ ELHG+     C  C      SE+  DF
Sbjct:   35 FRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLFAEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAG--SRRVLELHGSMDKLDCLDCHETYDWSEFVEDF 142          

HSP 2 Score: 44.669 bits (104), Expect = 5.114e-14
Identity = 19/35 (54.29%), Postives = 27/35 (77.14%), Query Frame = 3
Query:  117 LQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            ++++I + A+++ KSKH VVFTGAGIS   GIP F
Sbjct:    1 MEDEIRKAAEILAKSKHAVVFTGAGISAESGIPTF 35          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_CLOPE (NAD-dependent deacetylase OS=Clostridium perfringens GN=npdA PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 6.651e-14
Identity = 28/79 (35.44%), Postives = 46/79 (58.23%), Query Frame = 1
Query:  274 EASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGL 510
            +A L +  + P   H+AL +LE+ G LK +++QN+DGLH  +G   + + ELHG+     C  C + Y   F +E+ G+
Sbjct:   73 KAKLIYPNSKPNDAHIALAKLEEMGKLKAIVTQNIDGLHQMAG--SKNVFELHGSVLRNYCVDCHTFYDEKFILESKGV 149          

HSP 2 Score: 41.2022 bits (95), Expect = 6.651e-14
Identity = 17/35 (48.57%), Postives = 26/35 (74.29%), Query Frame = 3
Query:  117 LQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            + +KI +L ++I+ S ++V F GAG+ST  GIPDF
Sbjct:    1 MDDKINKLKEIIKNSNNIVFFGGAGVSTESGIPDF 35          
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_THESM (NAD-dependent deacetylase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=npdA PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 8.629e-14
Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = 1
Query:  223 RGPNGIWTLQREGKPLPEASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSC 465
            + PN +W+  +    + +       A P   H+AL ELEK GILK VI+QN+D LH  +G   + + ELHGN +   C  C
Sbjct:   55 KDPNLVWSFYKMRMKIMKG------AKPNNAHLALAELEKMGILKAVITQNIDNLHREAG--NQHIVELHGNIYRVKCTRC 127          

HSP 2 Score: 36.1946 bits (82), Expect = 8.629e-14
Identity = 15/31 (48.39%), Postives = 21/31 (67.74%), Query Frame = 3
Query:  129 IEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            IE+  ++I  S+ L+ FTGAG+S   GIP F
Sbjct:    2 IEEAPRIIAHSRFLIAFTGAGVSAESGIPTF 32          
The following BLAST results are available for this feature:
BLAST of CF509456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NPD_PYRHO3.729e-1543.88NAD-dependent deacetylase OS=Pyrococcus horikoshii... [more]
NPD_CALMQ6.293e-1537.62NAD-dependent deacetylase OS=Caldivirga maquilinge... [more]
NPD_RHOPA6.295e-1531.19NAD-dependent deacetylase OS=Rhodopseudomonas palu... [more]
NPD_SULTO6.297e-1534.75NAD-dependent deacetylase OS=Sulfolobus tokodaii G... [more]
NPD_PYRAB8.182e-1538.66NAD-dependent deacetylase OS=Pyrococcus abyssi GN=... [more]
NPD_PYRKO2.331e-1441.84NAD-dependent deacetylase OS=Pyrococcus kodakaraen... [more]
NPD_PYRFU3.031e-1440.57NAD-dependent deacetylase OS=Pyrococcus furiosus G... [more]
NPD2_ARCFU5.114e-1433.64NAD-dependent deacetylase 2 OS=Archaeoglobus fulgi... [more]
NPD_CLOPE6.651e-1435.44NAD-dependent deacetylase OS=Clostridium perfringe... [more]
NPD_THESM8.629e-1438.27NAD-dependent deacetylase OS=Thermococcus sibiricu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-963 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-78_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509456 ID=CF509456; Name=CF509456; organism=Citrus sinensis; type=EST; length=530bp
CAACCTTGGTATTAGAGAAACCAACAGCCATGTCTTTAGGCTATGCAGAG
AAGCTTTCTTACATTGAAGATGTGGGCAACGTTGGAATGGCTGAATTTTT
CGATTCACCTCAAAATTTGCAAGAAAAAATTGAACAACTTGCCAAATTAA
TACAGAAGAGCAAGCATCTAGTGGTGTTTACAGGTGCAGGAATCTCAACT
TCTTGTGGTATACCTGATTTTTCGAGGTCCAAATGGAATTTGGACACTGC
AGCGTGAGGGAAAACCCTTACCTGAAGCTTCCCTACCATTTCATCGCGCT
ATGCCAGGCATGACTCACATGGCTTTGGTTGAATTAGAGAAGGCTGGCAT
TTTAAAGTTTGTTATTAGTCAGAATGTTGATGGCCTTCATCTTCGGTCTG
GAATTCCAAGGGAGAAGCTTGCAGAATTGCATGGGAATTCCTTCATGGAG
GCTTGCCCTTCATGTGGAAGCGAGTATTTCCGTGACTTTGAGGTGGAAAC
AATTGGATTAAAAGAGACATCACCGACGTT
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