CF509539

Overview
NameCF509539
Unique NameCF509539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_CUPTR (Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.594e-29
Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEID+  +E Y   +   IKPQ D   FP+    +I+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +GKY   VY LPKHLDEKV            T LT +QA YI V
Sbjct:  342 FDNEIDIASIEKYEWDE---IKPQVDHVKFPDGKK-LIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTDQQAAYIGV 459          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_POLSQ (Adenosylhomocysteinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29
Identity = 69/126 (54.76%), Postives = 79/126 (62.70%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSG----IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEID+ G+E Y   K   IKPQ D  +FP  N      II+LA+GRL+NLGC TGHPS+VMS SF NQVIAQ+ELW    T KY   VY LPKHLDEKV            T L+ +QA YI V
Sbjct:  346 FDNEIDVAGIEKY---KWEEIKPQVDHVIFPAANGKPEKRIIILAKGRLVNLGCGTGHPSYVMSSSFANQVIAQIELWNAVGTDKYPIGVYTLPKHLDEKVARLQLKTLNAELTVLSDQQASYIGV 468          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_PLAF7 (Adenosylhomocysteinase OS=Plasmodium falciparum (isolate 3D7) GN=PFE1050w PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29
Identity = 65/122 (53.28%), Postives = 76/122 (62.30%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FD+EI +  L  Y G+    +KPQ DR   P  N  IIVLA GRL+NLGCATGHP+FVMS SF NQ  AQL+LW+ K T KYE KVY+LPKHLDEKV            T L   Q  ++ V
Sbjct:  346 FDDEIQVNELFNYKGIHIENVKPQVDRITLPNGNK-IIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGV 466          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29
Identity = 69/122 (56.56%), Postives = 81/122 (66.39%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEI +  L  + G  RI IKPQ D++VF E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW+      Y+  VY LPK LDE+V            T LTKEQADYI V
Sbjct:  342 FDNEIQVDALNNFKGATRINIKPQVDKYVF-ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQ----NDYKVGVYRLPKKLDEEVARLHLGQIGAKLTTLTKEQADYIGV 458          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29
Identity = 71/122 (58.20%), Postives = 82/122 (67.21%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEID+  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y  +VYVLPKHLDE V            T LTK+QADYISV
Sbjct:  348 FDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--QYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISV 463          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_DESVV (Adenosylhomocysteinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29
Identity = 70/122 (57.38%), Postives = 80/122 (65.57%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDM  LE   G   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V            TRL+K+QADYI V
Sbjct:  349 FDNEIDMHYLENTEGCVCLNIKPQVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGV 466          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_DESVH (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29
Identity = 70/122 (57.38%), Postives = 80/122 (65.57%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDM  LE   G   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V            TRL+K+QADYI V
Sbjct:  349 FDNEIDMHYLENTEGCVCLNIKPQVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGV 466          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28
Identity = 70/122 (57.38%), Postives = 83/122 (68.03%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEID+  L++Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+K+  +  Y+  VYVLPKHLDE V            T L+KEQADYI+V
Sbjct:  348 FDNEIDVASLKSYQWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFKKGDS--YQNNVYVLPKHLDEMVARLHLDKIGANLTELSKEQADYINV 463          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28
Identity = 68/122 (55.74%), Postives = 85/122 (69.67%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEID+  L+ Y   + + IKPQ D+ +FP+    ++VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V            T LT++QADYI V
Sbjct:  310 FDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLMVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGV 425          
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.762e-28
Identity = 64/122 (52.46%), Postives = 81/122 (66.39%), Query Frame = 2
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEI +  L T  GV++I IKPQ D+++ P  N+ + +LAEGRL+NLGCATGHPSFVMS SF NQ +AQ++LW+ K    YEK VY LPK LDE+V            T LT  QA Y+ +
Sbjct:  349 FDNEIQVDALNTLTGVQKINIKPQVDKFILPNGNT-LFLLAEGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWQNKDV--YEKNVYRLPKKLDEEVARLHLEKIGVKLTTLTANQAAYLGI 467          
The following BLAST results are available for this feature:
BLAST of CF509539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
SAHH_CUPTR1.594e-2954.92Adenosylhomocysteinase OS=Cupriavidus taiwanensis ... [more]
SAHH_POLSQ4.637e-2954.76Adenosylhomocysteinase OS=Polynucleobacter sp. (st... [more]
SAHH_PLAF74.637e-2953.28Adenosylhomocysteinase OS=Plasmodium falciparum (i... [more]
SAHH_CHLTE4.637e-2956.56Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_PROMM6.056e-2958.20Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_DESVV6.056e-2957.38Adenosylhomocysteinase OS=Desulfovibrio vulgaris s... [more]
SAHH_DESVH6.056e-2957.38Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_PROMA1.033e-2857.38Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_COXB11.033e-2855.74Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_XYLFM1.762e-2852.46Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-047 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509539 ID=CF509539; Name=CF509539; organism=Citrus sinensis; type=EST; length=369bp
CTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTGTTA
AGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAGACC
AACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGGATG
TGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACCAGG
TGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTACGAG
AAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGCTCT
TCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGCAGG
CTGACTACATCAGTGTGTC
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