CF509555

Overview
NameCF509555
Unique NameCF509555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 4.306e-69
Identity = 126/146 (86.30%), Postives = 139/146 (95.21%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS--DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV+LGAN++SERQPIGT+AQ   +KDYKEPPPAPLFE  EL SWSFYRAGIAEF+ATFLFLYI++LTVMGVSKS++KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQCLGAICGAGVV
Sbjct:    7 DVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVV 152          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 1.636e-68
Identity = 124/145 (85.52%), Postives = 136/145 (93.79%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQSD-KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV +GANKF ERQPIGT+AQ++ KDYKEPPPAP FEPGELKSWSFYRAGIAEF+ATFLFLY+TVLTVMGV ++   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY+VMQCLGAICGAGVV
Sbjct:    7 DVNVGANKFPERQPIGTAAQTESKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVV 151          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 3.086e-67
Identity = 125/147 (85.03%), Postives = 133/147 (90.48%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQSD---KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV LGANKF ERQP+G +AQS    KDY+EPPPAPLFEP EL SWSFYRAGIAEF+ATFLFLYITVLTVMGV + ++KC TVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQ LGAICGAGVV
Sbjct:    7 DVSLGANKFPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVV 153          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 5.263e-67
Identity = 125/146 (85.62%), Postives = 135/146 (92.47%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS--DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV+LGANKFSER  IGT+AQ   DKDYKEPPPAPLFEPGELKSWSFYR GIAEF+ATFLFLYI++LTVMGVSKS +KC+TVGIQGIAW+FGGMI ALVYCTAGIS GHINPAVTFGL LARKLSLTRAVFY++MQCLGAICG GVV
Sbjct:    7 DVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS-GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVV 151          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 3.412e-66
Identity = 121/146 (82.88%), Postives = 136/146 (93.15%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS--DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV+LGAN+++ERQPIGT+AQ   +KDY+EPP AP+FE  EL SWSFYRAGIAEF+ATFLFLYI++LTVMGV+KS +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAVFYM MQCLGAICGAGVV
Sbjct:    7 DVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVV 152          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 2.888e-65
Identity = 119/145 (82.07%), Postives = 132/145 (91.03%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS-DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV++G ++F ERQPIGT+A    +DY EPP APLFE  EL SWSFYRAGIAEF+ATFLFLY+TVLTVMGVSKS +KC TVGIQGIAWAFGGMIFALVYCTAG+SGGHINPAVTFGLLLARKLSLTRAV+Y+VMQCLGA+CGAGVV
Sbjct:   14 DVRVGVDRFPERQPIGTAADDLGRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVV 158          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.881e-48
Identity = 90/129 (69.77%), Postives = 103/129 (79.84%), Query Frame = 1
Query:  109 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            G   Q  KDY +PPPAP F+ GELK WSF+RA IAEF+AT LFLYITV TV+G  K    C++VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM+ QC GAICG G+V
Sbjct:   10 GQVHQHGKDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLV 138          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 3.208e-48
Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 1
Query:  130 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            KDY +PPPAPL + GELKSWSFYRA IAEF+AT LFLY+TV TV+G  K    C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM+ QCLGAICG G V
Sbjct:   15 KDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFV 136          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.547e-47
Identity = 90/130 (69.23%), Postives = 101/130 (77.69%), Query Frame = 1
Query:  124 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKS-------NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGV 492
            S KDY +PPPAPL +P EL  WS YRA IAEF+AT LFLYITVLT++G  +        NT+C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL L RK+SL RA+ YM+ QC GAICGAG+
Sbjct:   15 SAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGL 144          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.632e-47
Identity = 90/130 (69.23%), Postives = 100/130 (76.92%), Query Frame = 1
Query:  106 IGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            +    +  KDY +PPPAPL +  ELK WSFYRA IAEF+AT LFLY+TV TV+G       C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGAICG G+V
Sbjct:    5 VSEEGRHGKDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLV 134          
The following BLAST results are available for this feature:
BLAST of CF509555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PIP15_MAIZE4.306e-6986.30Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP15_ARATH1.636e-6885.52Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP2_PEA3.086e-6785.03Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP11_MAIZE5.263e-6785.62Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP13_ORYSJ3.412e-6682.88Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP16_MAIZE2.888e-6582.07Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP1_ATRCA1.881e-4869.77Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP27_ARATH3.208e-4874.59Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP27_MAIZE3.547e-4769.23Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP28_ARATH4.632e-4769.23Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-063 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509555 ID=CF509555; Name=CF509555; organism=Citrus sinensis; type=EST; length=495bp
TTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATCGTCAATGGA
AGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGC
AACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAGGAGCCACCA
CCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAG
AGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCTACATCACTG
TCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTC
GGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTGCCCTTGT
TTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAGCAGTGACCT
TCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCTGTCTTCTAC
ATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGTTGTC
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