CF509555

Overview
NameCF509555
Unique NameCF509555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 3.922e-46
Identity = 91/124 (73.39%), Postives = 101/124 (81.45%), Query Frame = 1
Query:  130 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            KDY +PPPAPLF+ GEL+ WSFYRA IAEF+AT LFLYITV TV+G  V  S  +C  VG  GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLLLARK+S+ RAV Y+V QCLG I G G+V
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIV 138          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 5.122e-46
Identity = 91/131 (69.47%), Postives = 105/131 (80.15%), Query Frame = 1
Query:  124 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNT-------KCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            S KDY++PPP PLF+  EL  WSFYRA IAEF+AT LFLY+T++TV+G  KS T       +C+ VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLLLARK++L RAV YMV QCLGAICG  +V
Sbjct:   13 SGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGY-KSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALV 142          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 8.736e-46
Identity = 93/135 (68.89%), Postives = 102/135 (75.56%), Query Frame = 1
Query:  109 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-KSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            G      +DY++PPP P F+  EL  WS YRA IAEF+AT LFLYITVLTV+G   +S+TK     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGAICG G V
Sbjct:    7 GPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFV 141          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.490e-45
Identity = 92/135 (68.15%), Postives = 102/135 (75.56%), Query Frame = 1
Query:  109 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-KSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            G      +DY++PPP P F+  EL  WS YRA IAEF+AT LFLY+TVLTV+G   +S+TK     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGAICG G V
Sbjct:    7 GPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFV 141          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.946e-45
Identity = 91/132 (68.94%), Postives = 102/132 (77.27%), Query Frame = 1
Query:  124 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            S KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G        V+ ++  CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RAV Y++ QCLGAICG G+V
Sbjct:   16 SAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLV 147          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.320e-45
Identity = 89/130 (68.46%), Postives = 100/130 (76.92%), Query Frame = 1
Query:  130 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            KDY +PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y+V QCLGAICG G+V
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLV 148          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.320e-45
Identity = 90/128 (70.31%), Postives = 102/128 (79.69%), Query Frame = 1
Query:  130 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-KSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            +DY++PPPAP  +  ELK WSFYRA IAEF+AT LFLYITVLTV+G   +S+T      C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y++ QCLGAICG G V
Sbjct:   16 RDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFV 143          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 4.336e-45
Identity = 89/130 (68.46%), Postives = 100/130 (76.92%), Query Frame = 1
Query:  130 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            KDY +PPPAPL +  EL SWS YRA IAEF+AT LFLYITV TV+G         S ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y+V QCLGAICG G+V
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLV 148          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.262e-44
Identity = 88/130 (67.69%), Postives = 100/130 (76.92%), Query Frame = 1
Query:  124 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            S KDY +PPP   FE  ELK WSFYRA IAEF+AT LFLY+TVLTV+G      ++     C++VG+ GI+WAFGGMIF LVYCTAGISGGHINPAVTFGL LA K+SL RAV YMV QCLGA CG G+V
Sbjct:   13 SGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLV 142          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.648e-44
Identity = 88/135 (65.19%), Postives = 100/135 (74.07%), Query Frame = 1
Query:  115 SAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            +A   KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         S  +  C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RA+ Y+V QCLGAICG G+V
Sbjct:    9 AAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLV 143          
The following BLAST results are available for this feature:
BLAST of CF509555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PIP26_ORYSJ3.922e-4673.39Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP25_ARATH5.122e-4669.47Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP22_ARATH8.736e-4668.89Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP23_ARATH1.490e-4568.15Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP22_ORYSJ1.946e-4568.94Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP21_ORYSJ3.320e-4568.46Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP21_ARATH3.320e-4570.31Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP21_MAIZE4.336e-4568.46Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP26_ARATH1.262e-4467.69Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP25_MAIZE1.648e-4465.19Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-063 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509555 ID=CF509555; Name=CF509555; organism=Citrus sinensis; type=EST; length=495bp
TTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATCGTCAATGGA
AGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGC
AACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAGGAGCCACCA
CCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAG
AGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCTACATCACTG
TCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTC
GGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTGCCCTTGT
TTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAGCAGTGACCT
TCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCTGTCTTCTAC
ATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGTTGTC
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