CF509555

Overview
NameCF509555
Unique NameCF509555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.319e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  199 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGA 474
            RA +AEF++T LF++  V + +  +K  S+    T G+  IA   G  +F  V   A ISGGH+NPAVTFGL +  ++++   VFY + Q LG+
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGS 112          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.078e-11
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  172 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAI 477
            G+  S S  +A ++EF+AT LF++  V + +  +K  S+      G+  IA A    +F  V   A ISGGH+NPAVT GL +   ++L    FY + QCLG+I
Sbjct:   10 GDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSI 113          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.408e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  184 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            S +F RA  AEF+AT +F++  + + +     N + S   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVFAEFLATLIFVFFGLGSAL-----NWQQSLPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.839e-11
Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 1
Query:  199 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTV----GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAI 477
            RA I+EF+AT +F++    +V+ + K     ST+    G+  +A A    +   V     +SGGH+NPAVTFG L+  ++SL RAV Y   Q LGA+
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAV 124          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 68.5514 bits (166), Expect = 1.839e-11
Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 1
Query:  190 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            + +R  +AEF+ TF  + I + +  G +  +   +      IA+ FG ++  L      +SG HINPAVT GL++   +S+ +  FY+V QC+GAI GA V+
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVI 117          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.401e-11
Identity = 37/101 (36.63%), Postives = 62/101 (61.39%), Query Frame = 1
Query:  199 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            RA +AEF +TF+F++    + + + K   ++  S   +  +A A    +FA V  +  +SGGH+NPAV+FG L+  ++S+ RAV+Y + Q LG+I  A V+
Sbjct:   21 RASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVL 121          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.401e-11
Identity = 37/100 (37.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  199 RAGIAEFMATFLFLYITVLTVMGVSK------SNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAI 477
            RA +AEF++TF+F++    +++ + K      ++T  +T G +  +A A    +FA V     +SGGH+NPAVTF  L+  ++S+ RA++Y V Q +GAI
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAI 123          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.401e-11
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  184 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            S +F RA ++EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA+FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.401e-11
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  184 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQAMPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.136e-11
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 1
Query:  172 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGA 474
            G+  S +  +A +AEF+AT LF++  V + +  +K  S+      G+  +A A    +F  V   A +SGGH+NPAVT GL +   +++   +FY + QCLG+
Sbjct:   10 GDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGS 112          
The following BLAST results are available for this feature:
BLAST of CF509555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
TIP21_ARATH6.319e-1240.43Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP23_ARATH1.078e-1138.46Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
AQP2_TALEU1.408e-1140.38Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
TIP32_MAIZE1.839e-1139.18Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQP_ANOGA1.839e-1135.29Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIPA_PHAVU2.401e-1136.63Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP32_ARATH2.401e-1137.00Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
AQP2_PROHA2.401e-1139.42Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
AQP2_HORSE2.401e-1139.42Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]
TIP_ANTMA3.136e-1134.95Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-063 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509555 ID=CF509555; Name=CF509555; organism=Citrus sinensis; type=EST; length=495bp
TTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATCGTCAATGGA
AGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGC
AACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAGGAGCCACCA
CCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAG
AGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCTACATCACTG
TCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTC
GGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTGCCCTTGT
TTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAGCAGTGACCT
TCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCTGTCTTCTAC
ATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGTTGTC
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