CF509563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12 Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 374 L+ LTV EA+ SA L+L + ++E + + +GL NTR G LSGGQ++R++I +E++ P ++F DEPTSGLDSA+ + V+S + L Q Sbjct: 168 LLPHLTVQEAMMVSAHLKLQEKDEG--RREMVKEILTALGLLPCANTRTGS-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQ 264
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: SNQ2_YEAST (Protein SNQ2 OS=Saccharomyces cerevisiae GN=SNQ2 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.023e-12 Identity = 37/109 (33.94%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 66 ITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLL-FLDEPTSGLDSAASYYVMSRIAKLDQRDHGV 389 I LTV E++ +SA+++ P + +K + E I+ +G+++ +G G GL+ Q++++SI +E++ +P LL FLDEPTSGLDS +S+ ++ + KL + + Sbjct: 939 IAELTVRESLQFSARMRRPQHLPDSEKMDYVEKIIRVLGMEEYAEALVGEVGC-GLNVEQRKKLSIGVELVAKPDLLLFLDEPTSGLDSQSSWAIIQLLRKLSKAGQSI 1046
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.023e-12 Identity = 34/95 (35.79%), Postives = 60/95 (63.16%), Query Frame = 3 Query: 75 LTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRI 359 +TV E++ YSA L+LP + K E + ++ + L D ++ +G G GLS Q++R++I +E++ P ++F+DEPT+GLD+ A+ VM + Sbjct: 900 ITVEESLKYSAWLRLPYNIDSKTKNELVKEVLETVELDDIKDSVVGLPGISGLSIEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAV 994
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.255e-12 Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTI 404 L+ LTV EA+ SA L+L + KKE + +GL +TR LSGGQ++R++I +E++ P ++F DEPTSGLDSA+ + V+S + L Q G RTI Sbjct: 152 LLPHLTVLEAMMVSANLKLSEKQEV--KKELVTEILTALGLMSCSHTRTAL-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQ-----GGRTI 253
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: BROWN_DROVI (Protein brown OS=Drosophila virilis GN=bw PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.863e-12 Identity = 36/104 (34.62%), Postives = 63/104 (60.58%), Query Frame = 3 Query: 66 ITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 377 + T T + +Y+ + ++ TK +K++ + +GL+DA +TRI + LSGG+++R+S+ E++T P LF DEPT+GLDS ++Y V+ + L R Sbjct: 114 VKTFTAYDDLYFMSHFKMHRRTTKSEKRQAVSDLLLAVGLRDAAHTRI-----QQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYTVIKTLRHLCTR 212
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: ABCG5_RAT (ATP-binding cassette sub-family G member 5 OS=Rattus norvegicus GN=Abcg5 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.863e-12 Identity = 35/105 (33.33%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 66 ITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRD 380 +++LTV E + Y+A L L + K + E + E+ L + IG + G+S G++RRVSI ++L PK++ LDEPT+GLD + +++ + +L +R+ Sbjct: 140 LSSLTVRETLRYTAMLALRSSSADFYDK-KVEAVLTELSLSHVADQMIGNYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANHIVLLLVELARRN 243
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: WHT3_CAEEL (ABC transporter ATP-binding protein/permease wht-3 OS=Caenorhabditis elegans GN=wht-3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.963e-12 Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 3 Query: 66 ITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWG-AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 368 I TLTV E + A+L++ K ++ER + I+ + LQ+ + +IG G KG+SGG+ RR++ E+L+ P LLF DEPTSGLDS + V+ + L Sbjct: 126 IPTLTVDEYLMIQARLRMK--ANKHTRRERVDEIIEMLRLQNCRDLKIGTPGLVKGISGGEARRLTFACELLSNPSLLFADEPTSGLDSFMAASVVQILKNL 225
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: ABCGG_DICDI (ABC transporter G family member 16 OS=Dictyostelium discoideum GN=abcG16 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.963e-12 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 3 Query: 78 TVSEAVYYSAQLQLP-DTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 368 TV EA+ +SA L+LP DTMT K + + + + L NT IG G++ Q++RV+I IEM + P +LFLDEPT+GL S A+ +M I ++ Sbjct: 933 TVREAITFSALLRLPNDTMTHQDKLDTVDYILDVLELNSIANTLIGKVD-HGITQEQRKRVNIAIEMASLPDILFLDEPTTGLTSVAAELIMQLIKRV 1029 HSP 2 Score: 66.2402 bits (160), Expect = 5.810e-11 Identity = 30/103 (29.13%), Postives = 64/103 (62.14%), Query Frame = 3 Query: 66 ITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 374 I+TLTV E + +S + Q +++ KK+ + + +G+ +T IG +G+SGGQK+R+++ +E++ K + +D+ T+GLDS +++ +++ I + + Sbjct: 258 ISTLTVKETLEFSIECQ--SNLSREAKKQLSSNILSILGISHVADTYIGNQSIRGISGGQKKRMTVAVELVKGAKAIMIDQATNGLDSTSAFELLNSIQMISK 358
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.171e-11 Identity = 37/103 (35.92%), Postives = 66/103 (64.08%), Query Frame = 3 Query: 72 TLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIG-GWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 377 +LTV E + + A L+L ++K +++ + ++ GL A TRIG G K LSGG+++R++ +E+L P +LF DEPT+GLDS ++ +++ + +L Q+ Sbjct: 162 SLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQK 264
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: ABCGA_DICDI (ABC transporter G family member 10 OS=Dictyostelium discoideum GN=abcG10 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.171e-11 Identity = 39/99 (39.39%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 75 LTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK-GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 368 LTV EA+ +SA+L+ T++ K E E ++ M ++ + IG G+S +++R++I IE++ +P +LFLDEPTSGLDS +SY ++ I KL Sbjct: 928 LTVREALRFSAKLRQEPTVSLQDKYEYVEQVLEMMEMKHLGDALIGSLETGIGISVEERKRLTIGIELVAKPHILFLDEPTSGLDSQSSYNIVKFIRKL 1026 The following BLAST results are available for this feature:
BLAST of CF509563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509563 ID=CF509563; Name=CF509563; organism=Citrus sinensis; type=EST; length=404bpback to top |