CF509565

Overview
NameCF509565
Unique NameCF509565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509565 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.989e-18
Identity = 46/132 (34.85%), Postives = 77/132 (58.33%), Query Frame = 2
Query:   92 FNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAP---LHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELML 478
            +   FN  M  +T+ I+   L+     +  + +VD+GG+ G  + ++  +YP + GINFD   VI  +     HP ++HVAGD F+SVP+ D   +K IL  + DE C +LLK   KS+  + K+I+++++L
Sbjct:  144 YKNEFNDGMIGYTTHILK-FLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIIL 274          
BLAST of CF509565 vs. ExPASy Swiss-Prot
Match: DMPM_STRAD (O-demethylpuromycin-O-methyltransferase OS=Streptomyces alboniger GN=dmpM PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.017e-13
Identity = 50/175 (28.57%), Postives = 83/175 (47.43%), Query Frame = 2
Query:    2 HLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKHFNTAMYNHTSLIMSNIL-ESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPH-------VIEHAPLHPHIEHVAGDMFQSVPKG-DAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTS 499
            H   +I  G   F++  G   F Y    P  +  F ++M   T  + + +  E    F++   +VD+GG  G  L A+ S +P ++G+ FD P         ++ A +        GD F  VP G D   LK ILHDW D     +L+    ++P   +++VVE++LP+  ++S
Sbjct:  145 HFDHSIRTGEPAFDQVFGTDFFSYLSERPELSGTFTSSMREATRTMSTALAKEEEYDFSSYGTVVDIGGADGSLLAAVLSAHPGVEGVVFDSPEGARDAAATLDAAGVGERGRVETGDFFTRVPGGGDLYVLKSILHDWSDARSADILRTVRAAMPAHARLLVVEVLLPDTVDSS 319          
BLAST of CF509565 vs. ExPASy Swiss-Prot
Match: HIOM_CHICK (Hydroxyindole O-methyltransferase OS=Gallus gallus GN=ASMT PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.517e-12
Identity = 52/180 (28.89%), Postives = 84/180 (46.67%), Query Frame = 2
Query:    2 HLKDAILEGGIPFNRAHGMHAFEYGRVDPRFNKH---FNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHA------PLHPHIEHVAGDMFQ-SVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESK 511
            +L DA+ EG   + RA G+ + +      R  +    F     +  S+   ++L ++   +   Q+ D+GG  G   Q     YP      +D P V++ A      P    I    GD F+ S+P+ D   L  ILHDWDD+ C +LL   YK+    G V++VE +L E  +  +E++
Sbjct:  120 YLTDAVREGRNQYERAFGISSKDLFGARYRSEEEMLKFLAGQNSIWSICGRDVLTAFD-LSPFTQIYDLGGGGGALAQECVFLYPNCTVTIYDLPKVVQVAKERLVPPEERRIAFHEGDFFKDSIPEADLYILSKILHDWDDKKCRQLLAEVYKACRPGGGVLLVESLLSEDRSGPVETQ 298          
BLAST of CF509565 vs. ExPASy Swiss-Prot
Match: HIOM_BOVIN (Hydroxyindole O-methyltransferase OS=Bos taurus GN=ASMT PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 49/171 (28.65%), Postives = 80/171 (46.78%), Query Frame = 2
Query:    2 HLKDAILEGGIPFNRAHGMHAFE-----YGRVDPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLH------PHIEHVAGDMFQ-SVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDGKVIVVELML 478
            HL +A+ EG   + +A G+ + E     Y   D R    F   + +   L  + +L ++   +    + D+GG  G   +A  S YP  + I FD P V++ A  H        I    GD F+ ++P+ D   L  +LHDW D  C  LL+  Y++    G ++V+E +L
Sbjct:  119 HLAEAVREGRNQYLKAFGIPSEELFSAIYRSEDERLQ--FMQGLQDVWRLEGATVLAAFD-LSPFPLICDLGGGSGALAKACVSLYPGCRAIVFDIPGVVQIAKRHFSASEDERISFHEGDFFKDALPEADLYILARVLHDWTDAKCSHLLQRVYRACRTGGGILVIESLL 286          
The following BLAST results are available for this feature:
BLAST of CF509565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
OMT11_DICDI3.989e-1834.85Probable inactive O-methyltransferase 11 OS=Dictyo... [more]
DMPM_STRAD1.017e-1328.57O-demethylpuromycin-O-methyltransferase OS=Strepto... [more]
HIOM_CHICK9.517e-1228.89Hydroxyindole O-methyltransferase OS=Gallus gallus... [more]
HIOM_BOVIN8.057e-1128.65Hydroxyindole O-methyltransferase OS=Bos taurus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-073 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509565 ID=CF509565; Name=CF509565; organism=Citrus sinensis; type=EST; length=528bp
CCATCTCAAAGATGCTATTCTTGAAGGAGGAATTCCATTTAATCGAGCCC
ATGGAATGCATGCATTTGAGTACGGACGAGTGGACCCTAGGTTCAATAAA
CATTTTAACACAGCAATGTATAACCATACCTCTCTGATTATGAGCAACAT
TCTTGAATCTTACAAGGGCTTCGCCAACATCAAGCAACTGGTCGATGTTG
GTGGCAATCTCGGCGTTACTCTTCAAGCCATCACTTCCAAGTACCCCTAT
ATTAAGGGCATCAATTTCGACCAGCCTCATGTTATTGAGCATGCCCCACT
ACATCCACATATTGAGCATGTAGCGGGTGATATGTTTCAAAGTGTTCCAA
AAGGCGACGCCATTTTTCTGAAGTGGATACTGCACGATTGGGACGATGAA
CATTGCTTGAAGTTGTTGAAGAATTGCTACAAAAGCGTTCCAGAAGATGG
AAAGGTAATCGTTGTGGAGTTAATGCTTCCAGAAGTTCCTAATACAAGCA
TTGAATCAAAATCAAATTCCCATATTGA
back to top