CF509577

Overview
NameCF509577
Unique NameCF509577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP3_MOUSE (Lipid phosphate phosphohydrolase 3 OS=Mus musculus GN=Ppap2b PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.391e-13
Identity = 49/140 (35.00%), Postives = 72/140 (51.43%), Query Frame = 2
Query:   11 ITGVITDAIKDAVGRPRPDFFWRCFPDGKGV--FDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRG-HVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFF 421
            I+   TD  K ++GR RP F   C PD   +   +   +N  C G++  ++E  KSF SGH S+S   + +L LYL  +   F  RG  + +  + F   ++A   G+SRV DY HH  DV  G   G +V+  C + FF
Sbjct:  140 ISQSFTDIAKVSIGRLRPHFLSVCDPDFSQINCSEGYIQNYRCRGEDSKVQEARKSFFSGHASFSMFTMLYLVLYLQAR---FTWRGARLLRPLLQFTLLMMAFYTGLSRVSDYKHHPSDVLAGFAQGALVA--CCIVFF 274          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP2_HUMAN (Lipid phosphate phosphohydrolase 2 OS=Homo sapiens GN=PPAP2C PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.429e-12
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 2
Query:   23 ITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNV--VCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFF--CYLQFF 421
            +TD  K  +GR RP+F   C PD   V  +V   +  VC G    + E   SF SGH+S+    + FL+LY+    R+  +   + +  + F     A  +G +RV DY HHW DV  G + G +V+    CY+  F
Sbjct:  112 LTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQA--RLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDF 246          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP3_BOVIN (Lipid phosphate phosphohydrolase 3 OS=Bos taurus GN=PPAP2B PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.172e-12
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 2
Query:   11 ITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNV--TRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRG-HVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFF 421
            I+   TD  K ++GR RP F   C PD   +  +V   +N  C G++  ++E  KSF SGH S+S   + +L LYL  +   F  RG  + +  + F   ++A   G+SRV D+ HH  DV  G   G +V+  C + FF
Sbjct:  140 ISQSFTDIAKVSIGRLRPHFLNVCNPDFSQINCSVGYIQNYRCRGEDSKVQEARKSFFSGHASFSMYTMLYLVLYLQAR---FTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAQGALVA--CCIVFF 274          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP3_HUMAN (Lipid phosphate phosphohydrolase 3 OS=Homo sapiens GN=PPAP2B PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.143e-12
Identity = 48/140 (34.29%), Postives = 71/140 (50.71%), Query Frame = 2
Query:   11 ITGVITDAIKDAVGRPRPDFFWRCFPDGKGV--FDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRG-HVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFF 421
            I+   TD  K ++GR RP F   C PD   +   +   +N  C G +  ++E  KSF SGH S+S   + +L LYL  +   F  RG  + +  + F   ++A   G+SRV D+ HH  DV  G   G +V+  C + FF
Sbjct:  139 ISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCSEGYIQNYRCRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQAR---FTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAQGALVA--CCIVFF 273          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP2_BOVIN (Lipid phosphate phosphohydrolase 2 OS=Bos taurus GN=PPAP2C PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.580e-11
Identity = 42/126 (33.33%), Postives = 63/126 (50.00%), Query Frame = 2
Query:   23 ITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNV-VCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVS 397
            +TD  K   GR RP+F   C PD   V  +    V VC G +  + E   SF SGH+S+    + FL+LY+    R+  +   + +  + F     A  +G +RV D+ HHW DV  G + G +V+
Sbjct:  112 LTDLAKYMTGRLRPNFLAVCDPDWSRVNCSAYVQVEVCRGSSANVTESRLSFYSGHSSFGMYCMVFLALYVQA--RLCWKWARLLRPTVQFFLVAFALYVGYTRVSDHKHHWSDVLVGLLQGALVA 235          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP2_RAT (Lipid phosphate phosphohydrolase 2 OS=Rattus norvegicus GN=Ppap2c PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 44/136 (32.35%), Postives = 64/136 (47.06%), Query Frame = 2
Query:   23 ITDAIKDAVGRPRPDFFWRCFPDGKGV-FDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFF--CYLQFF 421
            +TD  K  +GR RP F   C PD   V      +  VC G    + E   SF SGH+S+    + FL+LY+    R+  +   + +  + F     A  +G +RV D  HHW DV  G + G +V+    CY+  F
Sbjct:  112 LTDLAKYMIGRLRPSFLAVCDPDWSRVNCSGYVQVEVCRGSPANVTEARLSFYSGHSSFGMYCMLFLALYVQA--RLCWKWARLLRPTVQFFLVAFAIYVGYTRVSDNKHHWSDVLVGLLQGALVACLTVCYVSDF 245          
The following BLAST results are available for this feature:
BLAST of CF509577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
LPP3_MOUSE6.391e-1335.00Lipid phosphate phosphohydrolase 3 OS=Mus musculus... [more]
LPP2_HUMAN2.429e-1233.58Lipid phosphate phosphohydrolase 2 OS=Homo sapiens... [more]
LPP3_BOVIN3.172e-1235.00Lipid phosphate phosphohydrolase 3 OS=Bos taurus G... [more]
LPP3_HUMAN4.143e-1234.29Lipid phosphate phosphohydrolase 3 OS=Homo sapiens... [more]
LPP2_BOVIN4.580e-1133.33Lipid phosphate phosphohydrolase 2 OS=Bos taurus G... [more]
LPP2_RAT7.813e-1132.35Lipid phosphate phosphohydrolase 2 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-085 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509577 ID=CF509577; Name=CF509577; organism=Citrus sinensis; type=EST; length=520bp
TTCTGTGCTCATTACTGGTGTTATAACTGATGCAATTAAAGATGCTGTTG
GTCGTCCTCGCCCAGATTTCTTTTGGCGGTGTTTTCCTGATGGTAAAGGG
GTCTTTGATAATGTAACAAGGAACGTCGTGTGTACTGGGCAAAATCATGT
TATTAAGGAAGGGCACAAAAGTTTCCCAAGTGGACATACTTCGTGGTCTT
TTGCTGGTCTTGGTTTTCTTTCATTGTACTTGTCAGGAAAAATCAGGGTA
TTTGATCGTAGAGGCCATGTTGCAAAGCTCTGTATTGTTTTCCTACCATT
TCTTCTAGCTGCTCTGATAGGAGTTTCTCGAGTTGATGACTATTGGCATC
ATTGGCAAGATGTCTTTGGTGGAGCTATCATAGGGACAATTGTTTCTTTC
TTTTGTTACTTGCAATTCTTTCCACCTCCATATGATACAGATGGCTGGGG
GCCTCATGCATATTTTCAGATGTTGGCAGATTCTCGAAATGACCAGGAAT
CTAACAACGCCAACTGTCTC
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