CF509651

Overview
NameCF509651
Unique NameCF509651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length183
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CYAPA (Chaperone protein dnaK OS=Cyanophora paradoxa GN=dnaK-A PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.436e-23
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +KK NETILVFDLGGGTF
Sbjct:  141 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKKKNETILVFDLGGGTF 197          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CYAME (Chaperone protein dnaK OS=Cyanidioschyzon merolae GN=dnaK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.406e-23
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASLAYG +KK+NE ILVFDLGGGTF
Sbjct:  143 PAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLAYGLDKKSNEKILVFDLGGGTF 199          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNY3 (Chaperone protein dnaK2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.406e-23
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAG++VLRIINEPTAASLAYG +KK+NETILVFDLGGGTF
Sbjct:  143 PAYFNDSQRQATKDAGKIAGIEVLRIINEPTAASLAYGLDKKDNETILVFDLGGGTF 199          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_PORHA (Chaperone protein dnaK OS=Porphyra haitanensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.098e-22
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGLDVLRIINEPTAA L+YG +K+NNETILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAPLSYGLDKQNNETILVFDLGGGTF 198          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_EMIHU (Chaperone protein dnaK OS=Emiliania huxleyi GN=dnaK PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.098e-22
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASL+YG +KK+NETILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLSYGLDKKDNETILVFDLGGGTF 198          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK2_THEEB (Chaperone protein dnaK2 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.098e-22
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +KK NETILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKKANETILVFDLGGGTF 198          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK2_STRAW (Chaperone protein dnaK2 OS=Streptomyces avermitilis GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.434e-22
Identity = 49/57 (85.96%), Postives = 55/57 (96.49%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFND+QRTATKDAGRIAGL+VLRIINEPTAA+LAYG +KK +ET+LVFDLGGGTF
Sbjct:  141 PAYFNDAQRTATKDAGRIAGLEVLRIINEPTAAALAYGMDKKEHETVLVFDLGGGTF 197          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_GLOVI (Chaperone protein dnaK OS=Gloeobacter violaceus GN=dnaK PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.873e-22
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAGRIAG++VLRIINEPTAA+LAYG +KK NETILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGRIAGIEVLRIINEPTAAALAYGLDKKANETILVFDLGGGTF 198          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_PROMT (Chaperone protein dnaK OS=Prochlorococcus marinus (strain NATL2A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.448e-22
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTF 198          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_PROM5 (Chaperone protein dnaK OS=Prochlorococcus marinus (strain MIT 9515) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.448e-22
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTF
Sbjct:  142 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTF 198          
The following BLAST results are available for this feature:
BLAST of CF509651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CYAPA6.436e-2389.47Chaperone protein dnaK OS=Cyanophora paradoxa GN=d... [more]
DNAK_CYAME8.406e-2389.47Chaperone protein dnaK OS=Cyanidioschyzon merolae ... [more]
DNAK2_SYNY38.406e-2387.72Chaperone protein dnaK2 OS=Synechocystis sp. (stra... [more]
DNAK_PORHA1.098e-2287.72Chaperone protein dnaK OS=Porphyra haitanensis GN=... [more]
DNAK_EMIHU1.098e-2287.72Chaperone protein dnaK OS=Emiliania huxleyi GN=dna... [more]
DNAK2_THEEB1.098e-2289.47Chaperone protein dnaK2 OS=Thermosynechococcus elo... [more]
DNAK2_STRAW1.434e-2285.96Chaperone protein dnaK2 OS=Streptomyces avermitili... [more]
DNAK_GLOVI1.873e-2287.72Chaperone protein dnaK OS=Gloeobacter violaceus GN... [more]
DNAK_PROMT5.448e-2285.96Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK_PROM55.448e-2285.96Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-159 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509651 ID=CF509651; Name=CF509651; organism=Citrus sinensis; type=EST; length=183bp
TGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGGATGCTGGT
CGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCTACTGCTGC
TTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCATCCTAGTGT
TTGACCTTGGTGGTGGTACCTTCTTGATGTTTC
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