CF509676

Overview
NameCF509676
Unique NameCF509676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 1.846e-103
Identity = 187/230 (81.30%), Postives = 199/230 (86.52%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  108 KEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYG 337          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 2.412e-103
Identity = 187/230 (81.30%), Postives = 198/230 (86.09%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQV-XXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCF GGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PDT++ERPL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GI+DWNSIFWIAHPGGPAILDQV             ATR +LSEYG
Sbjct:  110 KEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFPGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAALIVGADPDTAIERPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLIEAFKPIGINDWNSIFWIAHPGGPAILDQVEHKLAPGRRANSRATRHILSEYG 339          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.150e-103
Identity = 185/229 (80.79%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGL+PSVKR MMYQQGCFAGGTVLRLAKDLAENN G+RVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PDT +E PL++LVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIELPLFELVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.150e-103
Identity = 186/229 (81.22%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF            P   VE+PL++LVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKN+EKSL+EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAIIIGSDPIPEVEKPLFELVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.150e-103
Identity = 186/229 (81.22%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLR+AKDLAENN GARVLVVCSEITAVTFRGPADTHLDSLVGQALF            P   VERPL+Q+V+ +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            +TRQVLSEYG
Sbjct:  107 KEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAENNAGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGSDPVVGVERPLFQIVTAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFDPLGISDWNSVFWIAHPGGPAILDQVEEKLGLKPEKLRSTRQVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 4.113e-103
Identity = 186/229 (81.22%), Postives = 197/229 (86.03%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWG PKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF            PD + ERPL+++VS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L+ AF+P+GI+DWNSIFWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  110 KEAAMKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAAAVIVGSDPDLTTERPLFEMVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALTTAFSPLGINDWNSIFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYG 338          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 5.372e-103
Identity = 186/230 (80.87%), Postives = 198/230 (86.09%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR V+ EYG
Sbjct:  112 KEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVMREYG 341          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 5.372e-103
Identity = 186/229 (81.22%), Postives = 197/229 (86.03%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PL+++VST+QTILPDSDGAIDGHLREVG+TFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIVGADPLPEVEKPLFEVVSTAQTILPDSDGAIDGHLREVGVTFHLLKDVPGLISKNIEKSLVEAFQPLGISDWNSLFWIAHPGGPAILDQVEEKLALKPEKLGATRHVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS3_SINAL (Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 7.016e-103
Identity = 186/230 (80.87%), Postives = 198/230 (86.09%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILD V            ATR VLSEYG
Sbjct:  112 KEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAAIIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYG 341          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 7.016e-103
Identity = 186/229 (81.22%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAATKAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+D HLDSLVGQALF            P   VE+PL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL+EAF P+ I+DWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFGDGAAAIIVGSDPIPEVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEAFQPLNITDWNSLFWIAHPGGPAILDQVELKLALKPEKLRATRHVLSEYG 335          
The following BLAST results are available for this feature:
BLAST of CF509676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHSY_ARAAL1.846e-10381.30Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]
CHSY_CHRAE2.412e-10381.30Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHSY_VITVI3.150e-10380.79Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHSY_HYPAN3.150e-10381.22Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSY_ANTMA3.150e-10381.22Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHS1_GERHY4.113e-10381.22Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHSY_CARAN5.372e-10380.87Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHS1_CASGL5.372e-10381.22Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]
CHS3_SINAL7.016e-10380.87Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 S... [more]
CHS2_CAMSI7.016e-10381.22Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-184 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509676 ID=CF509676; Name=CF509676; organism=Citrus sinensis; type=EST; length=693bp
GAAAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTA
AGATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGC
GCCGACTACCAGCTCACCAAACTGCTCGGCCTGCGCCCTTCCGTCAAGCG
CTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTTCGCC
TCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGTTGTC
TGTTCGGAGATCACGGCGGTCACTTTCCGCGGCCCTGCCGATACTCATCT
TGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGCTGTGA
TCGTGGGTGCCGATCCTGACACGTCGGTCGAGCGTCCGTTGTATCAGCTT
GTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATTGACGG
ACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGTCCCCG
GCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCGCCCCG
GTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCCGGTGG
GCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGAGGAGA
AGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTACATG
back to top