CF509676

Overview
NameCF509676
Unique NameCF509676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 9.164e-103
Identity = 185/229 (80.79%), Postives = 195/229 (85.15%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLR+AKDLAENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALF            P   VERPL+QLVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            +TR VL EYG
Sbjct:  107 KEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAVIVGSDPVVGVERPLFQLVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPLGISDWNSVFWIAHPGGPAILDQVEAKLGLKPEKLRSTRHVLGEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.197e-102
Identity = 186/229 (81.22%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PL+++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+ ISDWNSIFWIAHPGGPAILDQV            ATR VLS+YG
Sbjct:  107 KEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGSDPMPEVEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFRPLDISDWNSIFWIAHPGGPAILDQVEKKLALKPEKLRATRNVLSDYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.197e-102
Identity = 185/229 (80.79%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGL+PSVKRFMMYQQGCFAGGTV+RLAKDLAENNKGARVLVVCSEITAVTFRGP+D HLDSLVGQALF            PD  +ERPL+QLVS +QTILPDS GAIDGHLREVGLTFHLLKDVPGLISK+IEKSL+EAF P+GI DWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLQPSVKRFMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFGDGAAALIIGSDPDPDLERPLFQLVSAAQTILPDSGGAIDGHLREVGLTFHLLKDVPGLISKHIEKSLNEAFQPLGIRDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.197e-102
Identity = 185/229 (80.79%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGL+PSVKRFMMYQQGCFAGGTV+RLAKDLAENNKGARVLVVCSEITAVTFRGP+D HLDSLVGQALF            PD  +ERPL+QLVS +QTILPDS GAIDGHLREVGLTFHLLKDVPGLISK+IEKSL+EAF P+GI DWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLQPSVKRFMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDAHLDSLVGQALFGDGAAALIIGSDPDPDLERPLFQLVSAAQTILPDSGGAIDGHLREVGLTFHLLKDVPGLISKHIEKSLNEAFQPLGIHDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 372.474 bits (955), Expect = 1.197e-102
Identity = 185/229 (80.79%), Postives = 197/229 (86.03%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTV+RLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDS+VGQALF            P   VERPL++LVS +QT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNSIFWIAHPGGPAILDQV            ATRQVLS+YG
Sbjct:  107 KEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDRAAAMIIGSDPLPEVERPLFELVSAAQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLIEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLSLKPEKLRATRQVLSDYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 2.041e-102
Identity = 185/230 (80.43%), Postives = 198/230 (86.09%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PDTSV E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI KSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  112 KEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVLSEYG 341          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 370.163 bits (949), Expect = 5.940e-102
Identity = 187/229 (81.66%), Postives = 194/229 (84.72%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLR SVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF            P   VERPL++LVS SQT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+KSL EAF P+GISDWNSIFWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAAAIIIGSDPLPGVERPLFELVSASQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKSLVEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLRATRHVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 5.940e-102
Identity = 184/229 (80.35%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTV+RLAKDLAENNKGARVLVVCSEITAVTF GP+DTHLDS+VGQALF            P   VERPL++LVS +QT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNSIFWIAHPGGPAILDQV            ATRQVLS+YG
Sbjct:  107 KEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFSGPSDTHLDSMVGQALFGDGAAAMIIGSDPLPEVERPLFELVSAAQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLIEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLQATRQVLSDYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.758e-102
Identity = 186/229 (81.22%), Postives = 197/229 (86.03%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   VE+PL++LV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPHVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPLPQVEKPLFELVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSLFWIAHPGGPAILDQVEAKLSLKQRKMQATRHVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.758e-102
Identity = 185/229 (80.79%), Postives = 193/229 (84.28%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITHL+FCTTSGVDMPG DYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF            P   VERPL++LVS +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLS+YG
Sbjct:  107 KEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAGAIIIGSDPIPGVERPLFELVSAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKPEKLKATRNVLSDYG 335          
The following BLAST results are available for this feature:
BLAST of CF509676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHSY_PERFR9.164e-10380.79Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHSY_HYDMC1.197e-10281.22Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSE_IPOPU1.197e-10280.79Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSE_IPONI1.197e-10280.79Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHS2_SOLLC1.197e-10280.79Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_ARATH2.041e-10280.43Chalcone synthase OS=Arabidopsis thaliana GN=CHS P... [more]
CHSJ_PETHY5.940e-10281.66Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHS2_SOLTU5.940e-10280.35Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHSB_PEA7.758e-10281.22Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHSA_PETHY7.758e-10280.79Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-184 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509676 ID=CF509676; Name=CF509676; organism=Citrus sinensis; type=EST; length=693bp
GAAAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTA
AGATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGC
GCCGACTACCAGCTCACCAAACTGCTCGGCCTGCGCCCTTCCGTCAAGCG
CTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTTCGCC
TCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGTTGTC
TGTTCGGAGATCACGGCGGTCACTTTCCGCGGCCCTGCCGATACTCATCT
TGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGCTGTGA
TCGTGGGTGCCGATCCTGACACGTCGGTCGAGCGTCCGTTGTATCAGCTT
GTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATTGACGG
ACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGTCCCCG
GCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCGCCCCG
GTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCCGGTGG
GCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGAGGAGA
AGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTACATG
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