CF509677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509677 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.758e-19 Identity = 60/140 (42.86%), Postives = 76/140 (54.29%), Query Frame = 1 Query: 4 STMSRGSGGGYDRHITIFSPEGQSLSSRVCFQSC*GMLGLPLLVFEERIQXXXXXXXXXXTSFWIIQVSHIFSQSQSTLDCWQPGMTADARTLVHQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVV 423 S + S GYDRHITIFSPEG+ F++ L V + VS+IF S+ T+ G DAR +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ AYMRPLGV+ Sbjct: 2 SGAAAASAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISR-TIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVI 140
BLAST of CF509677 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 52/137 (37.96%), Postives = 76/137 (55.47%), Query Frame = 1 Query: 10 MSRGSGGGYDRHITIFSPEGQSLSSRVCFQSC*GMLGLPLLVFEERIQXXXXXXXXXXTSFWIIQ-VSHIFSQSQSTLDCWQPGMTADARTLVHQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLG 417 MSRGS G+DRHITIFSPEG+ F++ L + + S + V+ ++ SQS + C GM DA+ + +A+ EAA +++K GY+MP ++LAK +AD +Q YTQ+A MR LG Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAI-NSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQS-VGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLG 135
BLAST of CF509677 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.566e-14 Identity = 51/130 (39.23%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 31 GYDRHITIFSPEGQSLSSRVCFQSC*GMLGLPLLVFEERIQXXXXXXXXXXTSFWIIQVSHIFSQSQSTLDCWQPGMTADARTLVHQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGV 420 G+DR IT+FSPEG+ F++ + V + V H+F ++ + C G ADAR V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ A MRPLGV Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKG-IGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGV 134 The following BLAST results are available for this feature:
BLAST of CF509677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509677 ID=CF509677; Name=CF509677; organism=Citrus sinensis; type=EST; length=430bpback to top |