CF509722

Overview
NameCF509722
Unique NameCF509722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.362e-29
Identity = 72/172 (41.86%), Postives = 97/172 (56.40%), Query Frame = 1
Query:    1 SWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAF 516
            S   ++ +   F A+  K+GK Y    E+  RF  F++N+       + N     G+  F+D+T EE+R+ Y   R GA   +   KR  + +       P +VDWR+KGAV  VK QG CGSCWAFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD AF
Sbjct:   30 SLHVEESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARY---RNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAF 197          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 6.362e-29
Identity = 69/164 (42.07%), Postives = 96/164 (58.54%), Query Frame = 1
Query:   43 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            W   HG+ Y  + E+  R  +++ N++ I+ HN E       + + +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGGLMD AF+
Sbjct:   32 WKATHGRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQ 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.085e-28
Identity = 61/170 (35.88%), Postives = 99/170 (58.24%), Query Frame = 1
Query:   13 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFE 519
            +++   +F+ +  ++ K Y++  E ++RF  FK   + I  HN++  +YK+G+N +ADL+N+E+ ++          T   S   D  L     ++P +VDWR +  V  VKDQG CGSCW F +  ++EG N +  G L+SLSEQ+LVDC   + ++GC GG    AF+
Sbjct:  218 EEQASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESL----RSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQ 383          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.417e-28
Identity = 68/164 (41.46%), Postives = 96/164 (58.54%), Query Frame = 1
Query:   43 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFE 519
            W   H + Y  + E+  R  +++ N++ I+ HN E      ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     NEGCNGGLMDYAF+
Sbjct:   32 WKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQ 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.157e-28
Identity = 71/166 (42.77%), Postives = 93/166 (56.02%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            +E W   HGK YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+
Sbjct:   26 WELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSF---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC-VSENYGCGGGYMTTAFQ 187          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.123e-28
Identity = 72/168 (42.86%), Postives = 96/168 (57.14%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            +E W   H K YN   ++  R  I++ NL++I  HN E      TY++ +N   D+T+EE      G +       L   RS+   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+
Sbjct:   26 WELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLK-----VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQ 187          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.123e-28
Identity = 67/164 (40.85%), Postives = 97/164 (59.15%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            F++W  +H K Y+++ E   R ++F +N R I  HN  N T+K+ LN+F+D++  E +  +L +          S     YL   G   P S+DWRKKG  V+ VK+QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++ N GC GGL   AFE
Sbjct:   33 FKSWMKQHQKTYSSV-EYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSE-----PQNCSATKSNYLRGTGP-YPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFE 189          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.567e-27
Identity = 70/166 (42.17%), Postives = 92/166 (55.42%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            +E W   H K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G R    R+         Y P     +PDS+D+RKKG V  VK+QG CGSCWAFS+  A+EG  K  TG L++LS Q LVDC T  N GC GG M  AF+
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSY---SNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE-NYGCGGGYMTTAFQ 187          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.673e-27
Identity = 69/173 (39.88%), Postives = 100/173 (57.80%), Query Frame = 1
Query:   31 MFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV-----GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            ++  W   + K YN   ++ +R  I++ N++ I EHN  +     TY +GLN+F D+T EE+++ YL         +  S+ SD     V       A+PD +DWR+ G V EVKDQG+CGSCWAFST   +EG       + IS SEQ+LVDC   + N GC+GGLM+ A++
Sbjct:   20 LWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYL---------TEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQ 182          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.491e-27
Identity = 70/153 (45.75%), Postives = 87/153 (56.86%), Query Frame = 1
Query:   82 EKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFE 519
            E++ R  I++ NL+FI  HN E+     +Y VG+N   D+T EE          G+ R      RS        + LPDSVDWR+KG V  VK QGSCGSCWAFS   A+EG  K+ TG L+SLS Q LVDC T     N+GC GG M  AF+
Sbjct:   42 EEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIGY-----MGSLRIPRPWNRSGTLKSSSNQTLPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQ 189          
The following BLAST results are available for this feature:
BLAST of CF509722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP_TRYBB6.362e-2941.86Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATL1_PIG6.362e-2942.07Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CFAD_DICDI1.085e-2835.88Counting factor associated protein D OS=Dictyostel... [more]
CATL1_CERAE1.417e-2841.46Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATK_RAT3.157e-2842.77Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_HUMAN4.123e-2842.86Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATH_MOUSE4.123e-2840.85Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATK_MOUSE1.567e-2742.17Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATLL_FASHE2.673e-2739.88Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATS_RAT3.491e-2745.75Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-230 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509722 ID=CF509722; Name=CF509722; organism=Citrus sinensis; type=EST; length=519bp
AGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTTGT
GAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTTTG
AGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGAAC
CGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAGGA
GTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCT
TGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTG
CCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGA
TCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAG
AGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAG
GAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTT
GATGGACTATGCATTCGAG
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