CF509751

Overview
NameCF509751
Unique NameCF509751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 1
Query:  286 RHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERV 471
            +HYRGVRQRPWGK+AAEIRDP K  ARVWLGTFET             + +G++A LNFP RV
Sbjct:  146 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRV 208          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  277 TRRRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERV 471
            T ++HYRGVRQRPWGK+AAEIRDP +K  RVWLGTF+T             K +G+KA +NFP  V
Sbjct:  140 TEKKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEV 205          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  277 TRRRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERV 471
            T ++HYRGVRQRPWGK+AAEIRDP +K  RVWLGTF+T             K +G+KA +NFP  V
Sbjct:  133 TEKKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEV 198          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 1
Query:  283 RRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFP 462
            +RHYRGVR+RPWGK+AAEIRDP KK  RVWLGTF+T             K +G+KA LNFP
Sbjct:   69 QRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 1
Query:  277 TRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFP 462
            T  R +RGVRQRPWGKWAAEIRDP +  RVWLGTF+T            ++ +G  A+LNFP
Sbjct:   82 TATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP 143          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 1
Query:  277 TRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFP 462
            TRR+ +RGVRQRPWG+WAAEIRDP +  RVWLGT++T            +K KG  A  NFP
Sbjct:   93 TRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFP 154          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13
Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 1
Query:  289 HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGTT 483
            H+RGVR+RPWG++AAEIRDP K  RVWLGTF+T             +F+G+KAK NFP   + TT
Sbjct:   32 HFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTT 96          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 1
Query:  286 RHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGTTE 486
            RHYRGVR+RPWGK+AAEIRDP KK  R+WLGT++T             + +G KA LNFP  V+ T+E
Sbjct:   86 RHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDVRVTSE 153          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 1
Query:  283 RRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERV 471
            ++HYRGVRQRPWGK+AAEIRDP K+ +RVWLGTF+T             + +G+KA LNFP  V
Sbjct:  153 KKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEV 216          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 1
Query:  292 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQG 477
            Y+G+R+RPWG+WAAEIRDP K  RVWLGTF T             + +G KAKLNFP    G
Sbjct:   25 YKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSG 86          
The following BLAST results are available for this feature:
BLAST of CF509751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
EF100_ARATH3.725e-1460.32Ethylene-responsive transcription factor 1A OS=Ara... [more]
ERF5_TOBAC4.865e-1456.06Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF5_NICSY6.354e-1456.06Ethylene-responsive transcription factor 5 OS=Nico... [more]
EF105_ARATH6.354e-1460.66Ethylene-responsive transcription factor ERF105 OS... [more]
CRF1_ARATH6.354e-1454.84Ethylene-responsive transcription factor CRF1 OS=A... [more]
PTI6_SOLLC8.298e-1454.84Pathogenesis-related genes transcriptional activat... [more]
ERF80_ARATH1.084e-1353.85Ethylene-responsive transcription factor 9 OS=Arab... [more]
EF104_ARATH1.415e-1354.41Ethylene-responsive transcription factor ERF104 OS... [more]
EF102_ARATH1.415e-1356.25Ethylene-responsive transcription factor 5 OS=Arab... [more]
ERF73_ARATH1.849e-1353.23Ethylene-responsive transcription factor ERF073 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-259 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509751 ID=CF509751; Name=CF509751; organism=Citrus sinensis; type=EST; length=705bp
GCTTATTGTAACTGCAAAAAAGTGGATCATCGAAGGCATGGAAAGCGGCC
ACTTCCACTGGAAGCATCACCGGAGGAGAAAGAGAAAGAACAAGACAACA
ACTTCCCTGCTTGGACTACTCATGAATCAGACATGTCTGCCATGGTTTCC
GCTCTTACACAAGTAATTGGCACCACTACCACCGACGCCGACGCCGACCC
CTCGCCGGCAGCCGTTAAAGAAGAATCCTCCGATAACCCACTTCAACAAA
CTCAAACTCAAGATCAAGATCAAGGTACAAGGAGGAGACATTACAGAGGA
GTAAGACAAAGACCTTGGGGCAAATGGGCAGCCGAAATTAGAGACCCTAA
AAAGGCAGCACGAGTATGGCTAGGTACATTTGAGACTGCTGAAGATGCAG
CCATGGCTTATGATAAAGCTGCCCTCAAATTCAAAGGCACCAAAGCTAAG
CTTAATTTCCCTGAAAGAGTTCAGGGTACTACTGAGTTTGTGTATTTAGA
TTCATCATCATCAAGCTCTGCCTTTCATCATCATCATGAGTCGGTGATGC
CTGCTCCTCCTCCTAGGCCTACATCAATGCACCATGGTGCATACCCGGAC
TTGCTTCAATATGCTCAAATTCTATCTTCTGATGATGCTACTTTTAATTA
CTATACGTCCAATCTCTTTAATCCACAATCATCATCTTGGTCTTCTTCTA
CTCCT
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