CF509751

Overview
NameCF509751
Unique NameCF509751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 1
Query:  286 RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNF 459
            + +RGVRQRPWGKWAAEIRDP++  R+WLGTFET            ++ +G  A  NF
Sbjct:  123 KKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNF 180          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 1
Query:  280 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGTT 483
            R + Y+G+R R WGKW AEIR+P K +R+WLG++ T               +G  A+LNFPE + G T
Sbjct:   26 RDKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVT 93          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.730e-11
Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 1
Query:  277 TRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 465
            T ++ YRGVRQR WGKW AEIR PK   R+WLGTF+T             K +G  A+LNFP+
Sbjct:   88 TAQKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQ 150          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11
Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 1
Query:  292 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 465
            YRG R R WGKW +EIR+P+K +R+WLGTF T            L  KG+ A LNFPE
Sbjct:   26 YRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPE 83          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11
Identity = 31/58 (53.45%), Postives = 35/58 (60.34%), Query Frame = 1
Query:  292 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 465
            YRGVR R WGKW +EIR P+K  R+WLGTF T            L  KG+ A LNFPE
Sbjct:   79 YRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPE 136          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1
Query:  277 TRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQ 474
            TR   Y GVR+R WGKW +EIR+P+K +R+WLG+F                 KG KA+LNFPE ++
Sbjct:   40 TRHPVYHGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEIE 105          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11
Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1
Query:  214 VKEESSDNPLXXXXXXXXXXGTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGTTE 486
            VK ES+ +P+           T  + +RGVRQRPWGKWAAEIRDP K  R+WLGT+ T            ++ +G  A  NF       TE
Sbjct:  100 VKSESTVSPVVSATTTT----TGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATE 186          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  286 RHYRGVRQRPWGKWAAEIRD-PKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERV 471
            + YRGVR+RPWGK+AAEIRD  +  ARVWLGTFET             + +G KA LNFP  +
Sbjct:   57 KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEI 119          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 1
Query:  292 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFP 462
            YRGVR+RPWG++AAEIRDP K +RVWLGTF++               +G KAK NFP
Sbjct:   27 YRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFP 83          
BLAST of CF509751 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 32/60 (53.33%), Postives = 36/60 (60.00%), Query Frame = 1
Query:  292 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERV 471
            YRGVRQR WGKW AEIR PK   R+WLGTFET             + +G  AKLNFP  +
Sbjct:   71 YRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLI 130          
The following BLAST results are available for this feature:
BLAST of CF509751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
CRF3_ARATH1.325e-1151.72Ethylene-responsive transcription factor CRF3 OS=A... [more]
RA210_ARATH1.730e-1142.65Ethylene-responsive transcription factor RAP2-10 O... [more]
ERF60_ARATH1.730e-1150.79Ethylene-responsive transcription factor ERF060 OS... [more]
ERF42_ARATH2.260e-1151.72Ethylene-responsive transcription factor ERF042 OS... [more]
ERF36_ARATH2.260e-1153.45Ethylene-responsive transcription factor ERF036 OS... [more]
ERF23_ARATH2.260e-1145.45Ethylene-responsive transcription factor ERF023 OS... [more]
CRF2_ARATH2.260e-1140.66Ethylene-responsive transcription factor CRF2 OS=A... [more]
PTI5_SOLLC2.951e-1152.38Pathogenesis-related genes transcriptional activat... [more]
ERF83_ARATH2.951e-1154.39Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF56_ARATH2.951e-1153.33Ethylene-responsive transcription factor ERF056 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-259 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509751 ID=CF509751; Name=CF509751; organism=Citrus sinensis; type=EST; length=705bp
GCTTATTGTAACTGCAAAAAAGTGGATCATCGAAGGCATGGAAAGCGGCC
ACTTCCACTGGAAGCATCACCGGAGGAGAAAGAGAAAGAACAAGACAACA
ACTTCCCTGCTTGGACTACTCATGAATCAGACATGTCTGCCATGGTTTCC
GCTCTTACACAAGTAATTGGCACCACTACCACCGACGCCGACGCCGACCC
CTCGCCGGCAGCCGTTAAAGAAGAATCCTCCGATAACCCACTTCAACAAA
CTCAAACTCAAGATCAAGATCAAGGTACAAGGAGGAGACATTACAGAGGA
GTAAGACAAAGACCTTGGGGCAAATGGGCAGCCGAAATTAGAGACCCTAA
AAAGGCAGCACGAGTATGGCTAGGTACATTTGAGACTGCTGAAGATGCAG
CCATGGCTTATGATAAAGCTGCCCTCAAATTCAAAGGCACCAAAGCTAAG
CTTAATTTCCCTGAAAGAGTTCAGGGTACTACTGAGTTTGTGTATTTAGA
TTCATCATCATCAAGCTCTGCCTTTCATCATCATCATGAGTCGGTGATGC
CTGCTCCTCCTCCTAGGCCTACATCAATGCACCATGGTGCATACCCGGAC
TTGCTTCAATATGCTCAAATTCTATCTTCTGATGATGCTACTTTTAATTA
CTATACGTCCAATCTCTTTAATCCACAATCATCATCTTGGTCTTCTTCTA
CTCCT
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