CF509765

Overview
NameCF509765
Unique NameCF509765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length564
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509765 vs. ExPASy Swiss-Prot
Match: OMT12_DICDI (O-methyltransferase 12 OS=Dictyostelium discoideum GN=omt12 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13
Identity = 49/190 (25.79%), Postives = 85/190 (44.74%), Query Frame = 3
Query:   12 FWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAVTDMP------QTDNLKYVVGDMFQFIPAADAFFFKTVFHLFDDEDCLKLLKKCREAIASNGERGKVLIVDIVINEKEDDRELTEAKLLFDTLMNFNVGGRERTEQEWESLFVNAG 563
            FW++   + +  + F+ AM+  + +    +     +    +++VD+GG  G     + E+ P I     DL + +          Q   LK+V GD F  +P AD +  K + H + DE C+ +L    +++  N   GK+ I D+V+    D    T+  +  D LM      +ER+  EW  LF   G
Sbjct:  135 FWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPN---GKLFINDLVL----DPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCG 317          
BLAST of CF509765 vs. ExPASy Swiss-Prot
Match: CM4T_STRPE (Carminomycin 4-O-methyltransferase OS=Streptomyces peucetius GN=dnrK PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 55/197 (27.92%), Postives = 89/197 (45.18%), Query Frame = 3
Query:    3 GLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPGIKCTVLDLPHAV-------TDMPQTDNLKYVVGDMFQFIP-AADAFFFKTVFHLFDDEDCLKLLKKCREAIASNGERGKVLIVDIVINEKED--DRELTEAKLLFDTLMNFNVGGRERTEQEWESLFVNAG 563
            G  F++ L     L   F+  +  D ++A          +  +R ++DVGGG G FA  I+   P +  TVL++   V        D   +D +  V GD F+ +P  ADA     V   + D D +++L +C EA+   G         I+I+E++D  +    E     D  M   +GG  RT ++W+ L  +AG
Sbjct:  139 GKPFYEDLAGRPDLRASFDSLLACDQDVA-FDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGR--------ILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAG 326          
BLAST of CF509765 vs. ExPASy Swiss-Prot
Match: OMT4_DICDI (O-methyltransferase 4 OS=Dictyostelium discoideum GN=omt4 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12
Identity = 53/191 (27.75%), Postives = 89/191 (46.60%), Query Frame = 3
Query:    3 GLKFWDYLNQNTALTKRFNQAMESDSEMATLIVKDCKPI-FQGLRSLVDVGGGTGAFARIISEAFP---GIKCTVLDLPHAVTDMPQTDNLKYVVGDMFQFIPAADAFFFKTVFHLFDDEDCLKLLKKCREAIASNGERGKVLIVDIVINEKEDDRELTEAKLLFDTLMNFNVGGRERTEQEWESLFVNAG 563
            G+  W  L +     + F  AM+  S  A  I    K I F   + +VD+GG  G F   I E +P   GI   +    +   ++ +   L++  G+ F+ +P  D +  K + H + DEDC+K+L+   ++I      GKV+I D +IN K       +  L  D +M    G  E+T +++ ++   AG
Sbjct:  136 GVNSWWDLIKKPGEEEFFKNAMKVSSSEA--IESALKFIDFSPFKKIVDIGGSHGRFVCEILEKYPNSHGINFDLESFFNGAGELIKNPRLEHKSGNFFESVPEGDCYILKRILHDWKDEDCIKILETIGKSILPG---GKVIIFDCIINPK----NYNKGHLYLDVMMFHFFGSEEKTIKQFSNISDKAG 317          
BLAST of CF509765 vs. ExPASy Swiss-Prot
Match: DMTA_DICDI (Des-methyl DIF-1 methyltransferase A OS=Dictyostelium discoideum GN=dmtA PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.488e-11
Identity = 51/195 (26.15%), Postives = 91/195 (46.67%), Query Frame = 3
Query:   15 WDYLNQNTALTKRFNQAMES--DSEMATLIVKDCKPIFQGLRSLVDVGGGTGAFARIISEAFPG--IKCTV-LDLPHAVTDMPQTDN---------LKYVVGDMF--QFIPAADAFFFKTVFHLFDDEDCLKLLKKCREAIASNGERGKVLIVDIVINEKEDDRELTEAKLLFDTLMNFNVGGRERTEQEWESLF 551
            W+   ++ +L   F+  M S    E+ T++       F   +S+VD+GG +G   + I+++  G  ++  +  DLP  +      +             V  D+F     P+AD +  K +FH+F+D+  L +L K  ++I  N   GKV + D ++  K        A   FD  M  N  G+ER++ EW+++F
Sbjct:  151 WELFEKDKSLNAHFHNTMTSFTSDEIKTILEYID---FNQYKSIVDLGGSSGELLKSIAKSSRGQLVESFINFDLPLVINQNKVNNENGAAEFDKRYSEVASDLFVDSDYPSADCYTLKFIFHMFNDDKVLTILDKISKSIKPN---GKVYVFDHIVQPKNQ----PYAPFYFDLQMIVNFNGKERSQNEWKTIF 335          
The following BLAST results are available for this feature:
BLAST of CF509765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
OMT12_DICDI1.543e-1325.79O-methyltransferase 12 OS=Dictyostelium discoideum... [more]
CM4T_STRPE2.228e-1227.92Carminomycin 4-O-methyltransferase OS=Streptomyces... [more]
OMT4_DICDI2.910e-1227.75O-methyltransferase 4 OS=Dictyostelium discoideum ... [more]
DMTA_DICDI5.488e-1126.15Des-methyl DIF-1 methyltransferase A OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-273 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509765 ID=CF509765; Name=CF509765; organism=Citrus sinensis; type=EST; length=564bp
GCGGGTTGAAGTTTTGGGACTATCTGAACCAGAACACTGCATTAACCAAG
CGGTTCAACCAAGCAATGGAAAGCGATTCTGAAATGGCAACCTTGATTGT
CAAAGACTGCAAGCCAATCTTTCAAGGGTTGCGCTCCCTGGTTGATGTAG
GAGGTGGAACGGGTGCATTCGCGAGAATCATATCTGAAGCATTCCCCGGC
ATCAAGTGCACAGTACTTGACCTCCCACATGCGGTCACTGACATGCCTCA
GACTGACAACTTGAAGTACGTAGTGGGTGATATGTTTCAGTTTATTCCTG
CGGCAGACGCCTTTTTCTTCAAGACGGTTTTTCATTTATTTGATGACGAG
GATTGCTTGAAGCTATTGAAGAAATGCAGAGAAGCTATCGCAAGCAATGG
CGAGAGAGGAAAGGTATTAATCGTCGATATTGTAATCAATGAAAAGGAAG
ATGACCGTGAATTAACAGAAGCAAAGCTCTTGTTTGACACTTTGATGAAC
TTTAATGTTGGTGGAAGGGAGAGAACTGAGCAAGAATGGGAAAGTCTTTT
CGTGAATGCCGGTT
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