CF509779

Overview
NameCF509779
Unique NameCF509779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.124e-60
Identity = 122/238 (51.26%), Postives = 162/238 (68.07%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSS---PQNKHIYTH------GHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            L+V++AI+   L+++D+HD  +P++  INSL D   YA+RT+ F    G L PLAIELSLP  +          +YT       G  A   W+W+LAKA+V  ND   HQL++HWL THA MEP++IAT+RQLS  HP++KLL PH R T+ INALARQ+LINGGGI E +  P ++A+ +SSA YK  W F  +ALP DL++RG+A  DP+ P  VRL+IEDYPYA DGL +W AI+
Sbjct:  412 LTVQQAIDGNLLYVVDHHDHFMPYLLDINSLDDNFIYATRTLLFLRGDGTLAPLAIELSLPHLQDDGLITARSTVYTPAARGGTGAGAVEWWVWQLAKAYVNVNDYCWHQLISHWLNTHAVMEPFVIATNRQLSVAHPVHKLLLPHYRDTMTINALARQTLINGGGIFEMTVFPRKHALAMSSAFYKD-WSFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIE 648          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOXE3_MOUSE (Epidermis-type lipoxygenase 3 OS=Mus musculus GN=Aloxe3 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24
Identity = 78/227 (34.36%), Postives = 115/227 (50.66%), Query Frame = 3
Query:    9 VEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++  +E   +F+ DY  L    +  INSL    T A   + + N  G+L PLAI+LS  P   SP    I+    D    W+  LAK  V +++  VH+   H+L TH   E + +AT RQL   HP+YKLL PH RYTL++N +AR +L+N  G+++   S GR  +    +   + + +    LP  +  RG+            L I +Y Y  DGL IW AI+
Sbjct:  314 LQTELERGHIFLADYWILAEAPVHCINSLQQYVT-APLCLLWLNPQGVLLPLAIQLSQTPGPESP----IFLPT-DCELDWL--LAKTWVRNSEFLVHENNTHFLCTHLLCEAFSMATLRQLPLCHPVYKLLLPHTRYTLQVNTIARATLLNPDGLVDKVTSIGRQGLIYLMSTGLAHFTYTDFCLPDSIRARGV------------LTIPNYHYRDDGLKIWAAIE 520          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOXE3_HUMAN (Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=ALOXE3 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 77/229 (33.62%), Postives = 113/229 (49.34%), Query Frame = 3
Query:    9 VEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTY--ASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++  +E   +F+ DY  L       +N    R+ Y  A   + + +  G L PLAI+LS  P   SP    I+       + W W LAK  V +++  VH+   H+L TH   E + +AT RQL   HPIYKLL PH RYTL++N +AR +L+N  G+++   S GR  +    +   + + +    LP  L  RG+            L I +Y Y  DGL IW AI+
Sbjct:  314 LQTELERGNIFLADYWILAEAPTHCLNG---RQQYVAAPLCLLWLSPQGALVPLAIQLSQTPGPDSP----IFL---PTDSEWDWLLAKTWVRNSEFLVHENNTHFLCTHLLCEAFAMATLRQLPLCHPIYKLLLPHTRYTLQVNTIARATLLNPEGLVDQVTSIGRQGLIYLMSTGLAHFTYTNFCLPDSLRARGV------------LAIPNYHYRDDGLKIWAAIE 520          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LX15B_MOUSE (Arachidonate 15-lipoxygenase B OS=Mus musculus GN=Alox15b PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 71/228 (31.14%), Postives = 106/228 (46.49%), Query Frame = 3
Query:    6 SVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            S++  +E+  LF++D+  L       +N  P         +   + +G L P+AI+L   P   +P    I+    D    W W LAK  V +++  +H+ V H L  H   E + +AT RQL   HP++KLL PH+RYTL IN LAR+ L+  G +I+ S   G                + +  LP D+  RG+ +            I  Y Y  DG+ IW AIK
Sbjct:  278 SLQAELEKGSLFLVDHGILSGVHTNILNGKPQFSAAPMTLLHQSSGSGPLLPIAIQLKQTPGPDNP----IFLPSDDT---WDWLLAKTWVRNSEFYIHEAVTHLLHAHLIPEVFALATLRQLPRCHPLFKLLIPHIRYTLHINTLARELLVAPGKLIDKSTGLGTGGFSDLIKRNMEQLNYSVLCLPEDIRARGVED------------IPGYYYRDDGMQIWGAIK 486          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LX15B_HUMAN (Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=ALOX15B PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 75/229 (32.75%), Postives = 108/229 (47.16%), Query Frame = 3
Query:    6 SVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAM-ELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            S++  +E+  LF++D+  L       IN  P         ++     G L PLAI+LS  P  +SP    I+    D    W W LAK  V + +   H+ + H L +H   E + +AT RQL   HP++KLL PH RYTL IN LAR+ LI  G +++ S   G     EL     K    + +  LP D+  RG+ +            I  Y Y  DG+ IW A++
Sbjct:  277 SLQAELEKGSLFLVDHGILSGIQTNVINGKPQFSAAPMTLLYQSPGCGPLLPLAIQLSQTPGPNSP----IFLPTDDK---WDWLLAKTWVRNAEFSFHEALTHLLHSHLLPEVFTLATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIVPGQVVDRSTGIGIEGFSELIQRNMKQL-NYSLLCLPEDIRTRGVED------------IPGYYYRDDGMQIWGAVE 485          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX5_MOUSE (Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alox5 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 75/232 (32.33%), Postives = 120/232 (51.72%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTV--FFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            LS+E+ ++E  +FI+DY   LL  I+   + P    + +  +   + N A  + P+AI+L+  P  S+P    I+       + + W LAK  V S+D  VHQ + H L TH   E + IA +RQL ++HP++KLL  H+R+T+ IN  AR+ LI   G+ + A+ + G   +++   A +    +     P  +  RGM +    MP         Y Y  DGLL+W AI+
Sbjct:  271 LSLEQEVQEGNIFIVDYE--LLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGESNP----IFL---PTDSKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDL-TYSSLCFPEAIKARGM-DSTEDMPF--------YFYRDDGLLVWEAIQ 483          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX5_MESAU (Arachidonate 5-lipoxygenase OS=Mesocricetus auratus GN=ALOX5 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 78/233 (33.48%), Postives = 121/233 (51.93%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTV--FFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGM-AEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            LS+E+ ++E  +FI+DY   LL  I+   + P    + +  +   + N A  + P+AI+L+  P   +P    I+    DA   W+  LAK  V S+D  VHQ + H L TH   E + IA +RQL ++HPI+KLL  H+R+T+ IN  AR+ LI   G+ + A+ + G   +++   A +    +     P  +  RGM + ED          I  Y Y  DGLL+W AI+
Sbjct:  270 LSLEQEVQEGNIFIVDYE--LLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQAPGEKNP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLCTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDL-TYSSLCFPEAIKARGMDSTED----------IPYYFYRDDGLLVWEAIQ 482          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: AOSL_PLEHO (Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.623e-20
Identity = 76/245 (31.02%), Postives = 123/245 (50.20%), Query Frame = 3
Query:    6 SVEKAIEEKRLFILDYHDLLL------PFIEKIN-SLPD---------RKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA-MELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++++ I++  ++I+D+  L+       P +E I   +PD         R   A   +F+ NK G L P+AI+++  P   +P    I+T  H+   H  W +AK  +   ++  HQL  H L TH + E + ++T R L+S HP++KLL PH+   L I+ + R+ LI  GGI++ S S G    +      +K     D   LP  L +RG+  +DPS   G       + Y  DGL +W AI+
Sbjct:  644 NLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLGHLMPIAIQINQEPGPENP----IWTP-HEENEH-DWMMAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYH-LPNALKKRGV--DDPSKLPG-------FYYRDDGLALWEAIE 872          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LX15B_RAT (Arachidonate 15-lipoxygenase B OS=Rattus norvegicus GN=Alox15b PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 68/228 (29.82%), Postives = 103/228 (45.18%), Query Frame = 3
Query:    6 SVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            S++  +E+  LF++D+  L       IN  P         ++    +G L P+AI+L   P   +P    I+    D    W W LAK  V + +  +H+ + H L  H   E + +AT RQL   HP++KLL PH RYTL IN LAR+ LI  G +++ S   G                + +  LP D+  R + +            +  Y Y  DG+ IW AI+
Sbjct:  278 SLQAELEKGSLFLVDHGILSGVQTNVINGKPQFSAAPMTLLYQSPGSGPLLPIAIQLKQTPGPDNP----IFLPSDDK---WDWLLAKTWVRNAEFSIHEALTHLLHAHLIPEVFALATLRQLPHCHPLFKLLIPHTRYTLHINTLARELLIAPGKVVDKSTGLGIGGFSDLIKRNMEQLSYSVLCLPEDIRARDVGD------------LPGYYYRDDGMQIWSAIR 486          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX5_HUMAN (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 75/232 (32.33%), Postives = 120/232 (51.72%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTV--FFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            LS+E+ +++  +FI+D+   LL  I+   + P    + +  +   + N A  + P+AI+L+  P   +P    I+    DA   W+  LAK  V S+D  VHQ + H L TH   E + IA +RQL ++HPI+KLL  H+R+T+ IN  AR+ LI   G+ + A+ + G   +++   A K    +     P  +  RGM  ++          I  Y Y  DGLL+W AI+
Sbjct:  271 LSLEQEVQQGNIFIVDFE--LLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENP----IFLPS-DAKYDWL--LAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDL-TYASLCFPEAIKARGMESKED---------IPYYFYRDDGLLVWEAIR 483          
The following BLAST results are available for this feature:
BLAST of CF509779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LOX2_ORYSJ1.124e-6051.26Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOXE3_MOUSE6.439e-2434.36Epidermis-type lipoxygenase 3 OS=Mus musculus GN=A... [more]
LOXE3_HUMAN3.196e-2333.62Epidermis-type lipoxygenase 3 OS=Homo sapiens GN=A... [more]
LX15B_MOUSE3.907e-2131.14Arachidonate 15-lipoxygenase B OS=Mus musculus GN=... [more]
LX15B_HUMAN1.137e-2032.75Arachidonate 15-lipoxygenase B OS=Homo sapiens GN=... [more]
LOX5_MOUSE2.532e-2032.33Arachidonate 5-lipoxygenase OS=Mus musculus GN=Alo... [more]
LOX5_MESAU5.641e-2033.48Arachidonate 5-lipoxygenase OS=Mesocricetus auratu... [more]
AOSL_PLEHO9.623e-2031.02Allene oxide synthase-lipoxygenase protein OS=Plex... [more]
LX15B_RAT2.144e-1929.82Arachidonate 15-lipoxygenase B OS=Rattus norvegicu... [more]
LOX5_HUMAN2.800e-1932.33Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-287 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509779 ID=CF509779; Name=CF509779; organism=Citrus sinensis; type=EST; length=691bp
GACTGAGCGTGGAAAAGGCTATTGAGGAGAAGAGATTGTTTATACTTGAT
TATCATGACTTGCTGCTGCCATTTATCGAGAAAATAAACTCCTTGCCAGA
TAGAAAAACATATGCCTCTAGGACAGTTTTCTTCTATAACAAGGCTGGCA
TGCTGAGGCCACTAGCTATAGAGCTATCCCTTCCTCCAACACGTTCTTCG
CCTCAGAATAAACACATTTACACTCATGGGCATGATGCTACAACACATTG
GATTTGGAAGCTGGCCAAAGCTCATGTCTGTTCAAATGATGCTGGAGTCC
ACCAACTAGTAAATCACTGGTTGATGACTCATGCTTCTATGGAGCCTTAT
ATAATTGCAACACACAGACAGCTTAGTTCAATGCACCCCATTTATAAGTT
GCTTCATCCTCACATGCGCTACACGCTAGAAATTAATGCACTTGCACGGC
AAAGTTTAATAAACGGAGGGGGTATAATTGAGGCTTCTTTCAGCCCAGGA
AGGTATGCCATGGAGCTAAGCTCTGCAGCCTACAAGAGTTTTTGGAGGTT
TGACATGGAGGCATTGCCTGCAGATCTTTTGCGCAGGGGTATGGCTGAGG
AGGATCCTTCAATGCCTAGCGGTGTAAGACTTGTGATTGAAGACTACCCG
TATGCAGCAGATGGGCTTCTTATCTGGTGTGCTATAAAGAG
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