CF509779

Overview
NameCF509779
Unique NameCF509779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX12_RABIT (Arachidonate 12-lipoxygenase, 12S-type OS=Oryctolagus cuniculus GN=ALOX12 PE=2 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 63/177 (35.59%), Postives = 85/177 (48.02%), Query Frame = 3
Query:  147 GMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIW 677
            G L P+ I+L LP   SSP    + T         +W LAK  V S+D  VH+L +H L  H   E + +AT R L S+HP++KL+ PH+RYTLEIN  AR  L++  GI +   S G            +F  +     P DL  RG+            L +E   YA D L +W
Sbjct:  310 GKLMPMVIQLHLPKIGSSPPPLFLPTD-----PPMVWLLAKCWVRSSDLQVHELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGL------------LGVESSFYAQDALRLW 469          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX15_RABIT (Arachidonate 15-lipoxygenase OS=Oryctolagus cuniculus GN=ALOX15 PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 6.237e-19
Identity = 63/177 (35.59%), Postives = 85/177 (48.02%), Query Frame = 3
Query:  147 GMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIW 677
            G L P+ I+L LP   SSP    + T         +W LAK  V S+D  VH+L +H L  H   E + +AT R L S+HP++KL+ PH+RYTLEIN  AR  L++  GI +   S G            +F  +     P DL  RG+            L +E   YA D L +W
Sbjct:  310 GKLMPMVIQLHLPKIGSSPPPLFLPTD-----PPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGL------------LGVESSFYAQDALRLW 469          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX5_RAT (Arachidonate 5-lipoxygenase OS=Rattus norvegicus GN=Alox5 PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 71/232 (30.60%), Postives = 117/232 (50.43%), Query Frame = 3
Query:    3 LSVEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTV--FFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIE-ASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            LS+E+ ++E  +FI+DY   LL  I+   + P    + +  +   + N A  + P+AI+L+  P   +P    I+       + + W LAK  V S+D  +HQ + H L TH   E + IA +RQL ++HP++KLL  H+R+T+ IN  AR+ L    G+ + A+ + G   +++   A +    +     P  +  RGM   +          I  Y Y  DGLL+W AI+
Sbjct:  270 LSLEQEVQEGNIFIVDYE--LLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGEKNP----IFL---PTDSKYDWLLAKIWVRSSDFHIHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLNCEYGLFDKANATGGGGHVQMVQRAVQDL-TYSSLCFPEAIKARGMDNTED---------IPYYFYRDDGLLVWEAIQ 482          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX15_PONAB (Arachidonate 15-lipoxygenase OS=Pongo abelii GN=ALOX15 PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.064e-18
Identity = 75/224 (33.48%), Postives = 104/224 (46.43%), Query Frame = 3
Query:    9 VEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFF-YNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIW 677
            +EK +E   LF  D+   LL  I+    L  ++  A+  V       G L P+ I+L LP T S P    + T    A     W LAK  V S+D  +H+L +H L  H   E  ++AT R L S+HPI+KL+ PH+RYTLEIN  AR  L++  GI +   S G            +F  +     P DL  RG+            L ++   YA D L +W
Sbjct:  264 LEKELEGGTLFEADFS--LLDGIKANVILCSQQHLAAPLVMLKLQPDGKLLPMVIQLQLPSTGSPPPPLFLPTDPPMA-----WLLAKCWVRSSDFQLHELQSHLLRGHLMAEVIVVATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLW 468          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX15_HUMAN (Arachidonate 15-lipoxygenase OS=Homo sapiens GN=ALOX15 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 75/224 (33.48%), Postives = 104/224 (46.43%), Query Frame = 3
Query:    9 VEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFF-YNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIW 677
            +EK +E   LF  D+   LL  I+    L  ++  A+  V       G L P+ I+L LP T S P    + T    A     W LAK  V S+D  +H+L +H L  H   E  ++AT R L S+HPI+KL+ PH+RYTLEIN  AR  L++  GI +   S G            +F  +     P DL  RG+            L ++   YA D L +W
Sbjct:  264 LEKELEGGTLFEADFS--LLDGIKANVILCSQQHLAAPLVMLKLQPDGKLLPMVIQLQLPRTGSPPPPLFLPTDPPMA-----WLLAKCWVRSSDFQLHELQSHLLRGHLMAEVIVVATMRCLPSIHPIFKLIIPHLRYTLEINVRARTGLVSDMGIFDQIMSTGGGGHVQLLKQAGAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLW 468          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LX12L_RAT (Arachidonate 12-lipoxygenase, leukocyte-type OS=Rattus norvegicus GN=Alox12l PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.896e-18
Identity = 66/178 (37.08%), Postives = 89/178 (50.00%), Query Frame = 3
Query:  147 GMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA-MELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIW 677
            G L P+AI+L LP T S+P    I+T          W LAK  V S+D  +H+L  H L  H   E + +AT R L S+HP++KLL PH+ YT+EIN  AR  LI+  G  + + S G    ++L   A  +F  +     P DL  RG+            L IE   YA D L +W
Sbjct:  310 GQLLPIAIQLELPKTGSTPPP--IFTPSDPPMD---WLLAKCWVRSSDLQLHELQAHLLRGHLMAELFAVATMRCLPSVHPVFKLLVPHLLYTMEINVRARSDLISERGFFDKAMSTGGGGHLDLLKQA-GAFLTYCSLCPPDDLAERGL------------LDIETCFYAKDALRLW 469          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LOX12_BOVIN (Arachidonate 12-lipoxygenase, 12S-type OS=Bos taurus GN=ALOX12 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.006e-18
Identity = 71/224 (31.70%), Postives = 104/224 (46.43%), Query Frame = 3
Query:    9 VEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA-MELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIW 677
            +EK +++  LF  D+  LL+     +     +   A   +      G L P+AI+L LP   S P    + T          W LAK  V S+D  +H+L +H L  H   E   +AT R L S+HP++KLL PH+RYT+EIN  AR  L++  G+ +   S G    +EL   A  +F  +     P DL  RG+            L ++   YA D L +W
Sbjct:  265 LEKELQQGTLFEADF-SLLMGIKANVILCTQQYVAAPLVMLKLQPDGKLLPMAIQLQLPHKGSPPPPLFLPTD-----PPMTWLLAKCWVRSSDFQLHELHSHLLRGHLVAEVIAVATMRCLPSIHPMFKLLIPHLRYTMEINIRARTGLVSDSGVFDQVVSTGGGGHVELLQRA-GAFLTYSSFCPPDDLADRGL------------LGVKSSFYAQDALRLW 469          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LX12B_HUMAN (Arachidonate 12-lipoxygenase, 12R type OS=Homo sapiens GN=ALOX12B PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.176e-17
Identity = 66/230 (28.70%), Postives = 105/230 (45.65%), Query Frame = 3
Query:    9 VEKAIEEKRLFILDYHDLL-LPFIEKINSLPDRKTY--ASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIWCAIK 689
            ++  +E+  +++ DY  +  +P +E    L  RK +  A   +  +   G + P+AI+LS  P    P    I+     + + W W LAK  V   +   H+ + H L TH   E + +A  R L   HP+YKLL PH RYT++IN++ R  L+N GG+     S G            S   +D   LP D + RG+ +            +  Y Y  D L +W A++
Sbjct:  304 LQAELEKGNIYLADYRIMEGIPTVE----LSGRKQHHCAPLCLLHFGPEGKMMPIAIQLSQTPGPDCP----IFL---PSDSEWDWLLAKTWVRYAEFYSHEAIAHLLETHLIAEAFCLALLRNLPMCHPLYKLLIPHTRYTVQINSIGRAVLLNEGGLSAKGMSLGVEGFAGVMVRALSELTYDSLYLPNDFVERGVQD------------LPGYYYRDDSLAVWNALE 510          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LX12L_MOUSE (Arachidonate 12-lipoxygenase, leukocyte-type OS=Mus musculus GN=Alox12l PE=1 SV=4)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 65/178 (36.52%), Postives = 89/178 (50.00%), Query Frame = 3
Query:  147 GMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGRYA-MELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIW 677
            G L P+AI+L LP T S+P    I+T   D    W+  LAK  V S+D  +H+L  H L  H   E + +AT R L S+HP++KLL PH+ YT+EIN  AR  LI+  G  +   S G    ++L   A  +F  +     P DL  RG+ + D               YA D L +W
Sbjct:  310 GQLLPIAIQLELPKTGSTPPP--IFTP-LDPPMDWL--LAKCWVRSSDLQLHELQAHLLRGHLVAEVFAVATMRCLPSVHPVFKLLVPHLLYTMEINVRARSDLISERGFFDKVMSTGGGGHLDLLKQA-GAFLTYSSLCPPDDLAERGLLDIDTCF------------YAKDALQLW 469          
BLAST of CF509779 vs. ExPASy Swiss-Prot
Match: LX12E_MOUSE (Arachidonate 12-lipoxygenase, epidermal-type OS=Mus musculus GN=Alox12e PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17
Identity = 74/229 (32.31%), Postives = 98/229 (42.79%), Query Frame = 3
Query:    9 VEKAIEEKRLFILDYHDLLLPFIEKINSLPDRKTYASRTVFFYNKAGMLRPLAIELSLPPTRSSPQNKHIYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLMTHASMEPYIIATHRQLSSMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEASFSPGR------YAMELSSAAYKSFWRFDMEALPADLLRRGMAEEDPSMPSGVRLVIEDYPYAADGLLIW 677
            +EK ++   LF +D+  LL      I     +   A   +      G L P+ I+L  PP    P           +     W LAK  V S+D  +HQL +H L  H   E   +AT R L S+HPIYKLL PH RYT+EIN LAR +L++  GI +   S G            S   Y+SF        P DL  RG+     S+            YA D L +W
Sbjct:  264 LEKELKAGSLFEVDF-SLLDGVKPNIIIFKQQYVTAPLVMLKLQPDGRLLPMVIQLQ-PPRHGCPPPLLFLP----SDPPMAWLLAKIWVRSSDFQLHQLQSHLLRGHLMAEVISVATMRSLPSLHPIYKLLAPHFRYTMEINTLARNNLVSEWGIFDLVVSTGSGGHVDILQRATSCLTYRSF------CPPDDLADRGLVGVKSSL------------YAQDALRLW 468          
The following BLAST results are available for this feature:
BLAST of CF509779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
LOX12_RABIT4.776e-1935.59Arachidonate 12-lipoxygenase, 12S-type OS=Oryctola... [more]
LOX15_RABIT6.237e-1935.59Arachidonate 15-lipoxygenase OS=Oryctolagus cunicu... [more]
LOX5_RAT8.146e-1930.60Arachidonate 5-lipoxygenase OS=Rattus norvegicus G... [more]
LOX15_PONAB1.064e-1833.48Arachidonate 15-lipoxygenase OS=Pongo abelii GN=AL... [more]
LOX15_HUMAN1.389e-1833.48Arachidonate 15-lipoxygenase OS=Homo sapiens GN=AL... [more]
LX12L_RAT6.896e-1837.08Arachidonate 12-lipoxygenase, leukocyte-type OS=Ra... [more]
LOX12_BOVIN9.006e-1831.70Arachidonate 12-lipoxygenase, 12S-type OS=Bos taur... [more]
LX12B_HUMAN1.176e-1728.70Arachidonate 12-lipoxygenase, 12R type OS=Homo sap... [more]
LX12L_MOUSE2.006e-1736.52Arachidonate 12-lipoxygenase, leukocyte-type OS=Mu... [more]
LX12E_MOUSE5.838e-1732.31Arachidonate 12-lipoxygenase, epidermal-type OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-287 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509779 ID=CF509779; Name=CF509779; organism=Citrus sinensis; type=EST; length=691bp
GACTGAGCGTGGAAAAGGCTATTGAGGAGAAGAGATTGTTTATACTTGAT
TATCATGACTTGCTGCTGCCATTTATCGAGAAAATAAACTCCTTGCCAGA
TAGAAAAACATATGCCTCTAGGACAGTTTTCTTCTATAACAAGGCTGGCA
TGCTGAGGCCACTAGCTATAGAGCTATCCCTTCCTCCAACACGTTCTTCG
CCTCAGAATAAACACATTTACACTCATGGGCATGATGCTACAACACATTG
GATTTGGAAGCTGGCCAAAGCTCATGTCTGTTCAAATGATGCTGGAGTCC
ACCAACTAGTAAATCACTGGTTGATGACTCATGCTTCTATGGAGCCTTAT
ATAATTGCAACACACAGACAGCTTAGTTCAATGCACCCCATTTATAAGTT
GCTTCATCCTCACATGCGCTACACGCTAGAAATTAATGCACTTGCACGGC
AAAGTTTAATAAACGGAGGGGGTATAATTGAGGCTTCTTTCAGCCCAGGA
AGGTATGCCATGGAGCTAAGCTCTGCAGCCTACAAGAGTTTTTGGAGGTT
TGACATGGAGGCATTGCCTGCAGATCTTTTGCGCAGGGGTATGGCTGAGG
AGGATCCTTCAATGCCTAGCGGTGTAAGACTTGTGATTGAAGACTACCCG
TATGCAGCAGATGGGCTTCTTATCTGGTGTGCTATAAAGAG
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