CF509787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509787 vs. ExPASy Swiss-Prot
Match: PSB2_SCHPO (Probable proteasome subunit beta type-2 OS=Schizosaccharomyces pombe GN=SPAC31A2.04c PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.663e-28 Identity = 64/145 (44.14%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 21 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMD 449 ME + + G F + + +SAV I V K ++DK +L+SH L+ GE GD F E+I N+SLY R+ + L+ A A+FTR +LAT+LR + PY VNILLAGY+ G P L+++DY+AT +V A GY S++ LS+ D Sbjct: 1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYIAANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSIFD 145
BLAST of CF509787 vs. ExPASy Swiss-Prot
Match: PSB2_PICGU (Probable proteasome subunit beta type-2 OS=Pichia guilliermondii GN=PRO2 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.539e-26 Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 21 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMD 449 M+ V G+ + T++ +A I V K +DK L+SH L+A SGE GD VQF E+IQ N LY R N L+ A A+F R +LAT++R + PY VN+LLAGYD TG PSL +IDY+ T ++ AA GY ++ S++D Sbjct: 1 MDIVLGIRVEDCTLVATSKAATRGISVLKDTDDKTRQLNSHNLMAYSGEAGDTVQFAEYIQANTQLYTMRENDTELSPKATASFVRNQLATSIRSRKPYQVNVLLAGYDTNTGKPSLNWIDYLGTQVELPYAAHGYAGFYCTSLLD 146
BLAST of CF509787 vs. ExPASy Swiss-Prot
Match: PSB2_YEAST (Proteasome component C11 OS=Saccharomyces cerevisiae GN=PRE1 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 2.080e-23 Identity = 55/145 (37.93%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 21 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMD 449 M+ + G+ IL + + I V K ++DK L H L++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + PY VN+L+ GYDK+ P LY IDY+ T ++ A GY +++ S++D Sbjct: 1 MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLD 145
BLAST of CF509787 vs. ExPASy Swiss-Prot
Match: PSB2_DROME (Probable proteasome subunit beta type-2 OS=Drosophila melanogaster GN=Prosbeta4R2 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 3.548e-23 Identity = 56/143 (39.16%), Postives = 84/143 (58.74%), Query Frame = 3 Query: 21 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMM 446 ME + G+ G F +L +DT S++ K ++ KI L ++A G+ GD +QFT+FI KN+ LY+ +G L+ +AA+FTR LA +R + Y V +LLAGYD GP L+YID ++ A G+GS F S++ Sbjct: 3 METILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSIL 145
BLAST of CF509787 vs. ExPASy Swiss-Prot
Match: PSB2_TRYBB (Proteasome subunit beta type-2 OS=Trypanosoma brucei brucei GN=PSB4 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.924e-19 Identity = 58/145 (40.00%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 48 DGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRKSP--YMVNILLAGY--------DKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMD 449 D + A +A + I + EDKI LDSHK++A +GE G R F E+++ N++L + R +G ++T A A+F R LA ALR Y VN LLAG+ D TG LYY+DY+ TL +V GYG+ F +M+D Sbjct: 12 DFVLVAAAGLNAFYYIKI-TDTEDKITELDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLD 155
BLAST of CF509787 vs. ExPASy Swiss-Prot
Match: PSB2_ENCCU (Probable proteasome subunit beta type-2 OS=Encephalitozoon cuniculi GN=PRE1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 39/143 (27.27%), Postives = 72/143 (50.35%), Query Frame = 3 Query: 21 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMD 449 M+ G+ G F I+ ADT SILV K N +K V+ ++A +G GD + ++ ++ + +NGI L+ + A+ + ++ +LR+ ++ ++AG E L+ +D + V A GY +YF ++D Sbjct: 1 MDSSIGIKGRNFAIVAADTKISSSILVVKENHEKFQVIKDRIVMAMTGNQGDAFRTMLYVSESALYEEIQNGIELSPSVLAHMIQNKVHESLRRRQLDISSIVAGRGPEK-YDLWSVDKYGAISSVPFCASGYAAYFVYGILD 142 The following BLAST results are available for this feature:
BLAST of CF509787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509787 ID=CF509787; Name=CF509787; organism=Citrus sinensis; type=EST; length=449bpback to top |