CF509855

Overview
NameCF509855
Unique NameCF509855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.445e-52
Identity = 102/218 (46.79%), Postives = 144/218 (66.06%), Query Frame = 1
Query:   37 IQHNRRLPDFLQSVNLKYVKLGYHY---LISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIH--LQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            I+  RRLPD L SV LKYVKLG H    + + L  L  +PL     +Q++ +  D   +LW +  +Q +  + + C   L F LT+++  R +PVYLVD+SCYKP    K S D F+  ++  G F + +++FQ++I  R+GLG+ETY P  + + PPK +M+ AR EAE VM+GALD+LF  T + P ++GIL+VNCSLFNPTPSLSAMIVN Y++R
Sbjct:   28 IRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMR 245          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.702e-51
Identity = 96/204 (47.06%), Postives = 147/204 (72.06%), Query Frame = 1
Query:   82 LKYVKLGYHYLISNLLTLCFIPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLT---GDFDESS---LEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            +K VK+ ++YL+++   LCF+PL++  +++ S ++  DL+  +++LQ N  S+ +    L  G T+++MTRP+PVYLVD+SCY PP +LKAS  + M+H +L    G + + S   ++F  KILERSGLG+ETY PE +  +P + ++A +R E E+V+ GA+DNLF NT ++P DIGILVVN S FNPTPSLS+++VNK++LR
Sbjct:    5 MKKVKIFFNYLMAHRFKLCFLPLMVAIAVEASRLSTQDLQNFYLYLQNNHTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSHLKASTQRIMQHVRLVREAGAWKQESDYLMDFCEKILERSGLGQETYVPEGLQTLPLQQNLAVSRIETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLR 208          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.199e-44
Identity = 90/190 (47.37%), Postives = 131/190 (68.95%), Query Frame = 1
Query:  133 LCFIPLIIITSIQVSEMNIDDLRQLWIH-LQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDF--------DESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            + FI L+   +++ S++N++DL++  +H  Q NL ++ +   ++VF   ++++TRP+PVYLVD+SCY PP +LK S    M H++   +          +  ++FQ KILERSGLG+ETY PE +   P +  M A+R+E E+V++GALDNLF NT V P DIGILVVN S FNPTPSL++MIVNKY+LR
Sbjct:   11 ILFISLMAGLAMKGSKINVEDLQKFSLHHTQNNLQTISLLLFLVVFVWILYMLTRPKPVYLVDFSCYLPPSHLKVSIQTLMGHARRAREAGMCWKNKESDHLVDFQEKILERSGLGQETYIPEGLQCFPLQQGMGASRKETEEVIFGALDNLFRNTGVKPDDIGILVVNSSTFNPTPSLASMIVNKYKLR 200          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS15_ARATH (3-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana GN=KCS15 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.102e-36
Identity = 82/207 (39.61%), Postives = 126/207 (60.87%), Query Frame = 1
Query:   58 PDFLQSVNLKYVKLGYHYLISNLLTLCF-IPLIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            PDFL   NL+YVKLGY YL+S   T CF +P +++  I VS                  + ++       F L ++    P  V+L+D+SCY+PP +LK +   F+E +  +G+F+E+++E QRK+L++SG+GEE+Y P  +     + ++   REEA  V++GA+D L + T +N K I ILV+NC + N TPSLSAM++N Y+LR
Sbjct:   22 PDFL-GYNLRYVKLGYIYLLSLSRTFCFFLPPLLLLFIFVSRF----------------LPILAFPLSTFFILLIYHYLTPSSVFLLDFSCYRPPDHLKITKSDFIELAMKSGNFNETAIELQRKVLDQSGIGEESYMPRVVFKPGHRVNLRDGREEAAMVIFGAIDELLAATKINVKHIKILVLNCGVLNTTPSLSAMVINHYKLR 211          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS14_ARATH (Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis thaliana GN=KCS14 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.298e-34
Identity = 74/176 (42.05%), Postives = 112/176 (63.64%), Query Frame = 1
Query:  148 LIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            L+++  I +S   +D L   + H  F+   V I   ++      +  TR +PVYLVD+SC++P  + K S + F   +K    + E +++F  +IL RSGLG++TY P  M   PP PSM  AR E+E V++GAL++LF  T + P+++GI +VNCSLFNP PSLS+MIVN+Y+L+
Sbjct:   10 LLLLILILLSLFELDLLH--FHHDFFSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLK 183          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.120e-34
Identity = 72/176 (40.91%), Postives = 112/176 (63.64%), Query Frame = 1
Query:  148 LIIITSIQVSEMNIDDLRQLWIHLQFNLVSVVICSAILVFGLTVFIMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            ++++  I +S   +D L   + H  F+   V I   ++      +  TR +PVYLVD+SC++P  + K S + F   +K    + + +++F  +IL RSGLG++TY P  M   PP PSM  AR E+E V++GAL++LF  T + P+++GI +VNCSLFNP PSLS+MIVN+Y+L+
Sbjct:   10 ILLLILILISLFELDLLH--FHHDFFSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTDETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLK 183          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS7_ARATH (3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.945e-33
Identity = 67/144 (46.53%), Postives = 100/144 (69.44%), Query Frame = 1
Query:  247 CSAILVFGLTVFIMTRPRPV-YLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            C  I VFG   F   +PR + YL+D+SCY+PP  L+A    F+EH  ++G FD+ SL+ Q+KILERSG+ ++   P  +H IPP  S++AAREE  ++++  + +LFS   ++PK I ILV NCSLF P+PS+++MI+NK+ +R
Sbjct:   30 CVLIAVFGYYFF---KPRCIIYLIDFSCYQPPDFLRAPVSNFIEHLTISGVFDQESLDLQQKILERSGISDDASVPATVHEIPPNASISAAREETHEILFAIVQDLFSKHEIDPKSIDILVSNCSLFCPSPSITSMIINKFGMR 170          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS20_ARATH (Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 55/165 (33.33%), Postives = 97/165 (58.79%), Query Frame = 1
Query:  211 IHLQFNLVSVVICSAILVF----GLTVF------IMTRPRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAMHAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            I +  + ++ ++ S + VF    GL V       I TR + VYL+D++CY+ P + +      +E   L    D+ S++FQ +ILERS L  +T  P ++  IP K S+++ + E    ++ ++++L     ++P+ I IL+ NCSL +P+PSLSAM++NK+ +R
Sbjct:   11 ISMSISELTTLLSSGVSVFEIFAGLLVVHLIYQRIRTRVK-VYLLDFTCYRAPDSNRVPMSTLIETIYLDDKLDQESIDFQARILERSWLSNQTSIPRSLMEIPLKKSLSSVKIETMTTIFTSVEDLLRKNKLSPRSIDILITNCSLHSPSPSLSAMVINKFHMR 174          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS21_ARATH (3-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana GN=KCS21 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.309e-18
Identity = 51/156 (32.69%), Postives = 85/156 (54.49%), Query Frame = 1
Query:  223 FNLVSVVICSAILVFGLTVFIMTR--PRPVYLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPE-AMHAIPPKPSMAAAREEAEQVMYGALDNLFSNT--NVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            F+L S+++ S + VF +  F+  R   R  Y++ Y CYK     K   +   +  +   +       F  + +  SG+GEETY P   +      P++  A  E +++M+  LD LF  T  +++P DI ILVVN SLF P+PSL++ ++N+Y++R
Sbjct:    4 FSLSSLLLLSTLFVFYIFKFVFKRRNQRNCYMLHYECYKGMEERKLDTETCAKVVQRNKNLGLEEYRFLLRTMASSGIGEETYGPRNVLEGREDSPTLLDAHSEMDEIMFDTLDKLFHKTKGSISPSDIDILVVNVSLFAPSPSLTSRVINRYKMR 159          
BLAST of CF509855 vs. ExPASy Swiss-Prot
Match: KCS12_ARATH (3-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana GN=KCS12 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13
Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  307 YLVDYSCYKPPHNLKASYDKFMEHSKLTGDFDESSLEFQRKILERSGLGEETYFPEAM-HAIPPKPSMAAAREEAEQVMYGALDNLFSNTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYRLR 675
            Y++DY C+KP  +   S     E      +   +  +F  K +  SG+GE+TY P  +      +PS+     E E+    ++  L     ++PKDI ILVVN S+ + TPSL++ I+N Y++R
Sbjct:   32 YILDYQCHKPTDDRMVSTQFSGEIIYRNQNLGLTEYKFLLKAIVSSGIGEQTYAPRLVFEGREERPSLQDGISEMEEFYVDSIGKLLERNQISPKDIDILVVNVSMLSSTPSLASRIINHYKMR 155          
The following BLAST results are available for this feature:
BLAST of CF509855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS1_ARATH5.445e-5246.793-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS16_ARATH2.702e-5147.063-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana... [more]
KCS8_ARATH3.199e-4447.373-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana ... [more]
KCS15_ARATH1.102e-3639.613-ketoacyl-CoA synthase 15 OS=Arabidopsis thaliana... [more]
KCS14_ARATH2.298e-3442.05Probable 3-ketoacyl-CoA synthase 14 OS=Arabidopsis... [more]
KCS13_ARATH5.120e-3440.913-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana... [more]
KCS7_ARATH1.945e-3346.533-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana ... [more]
KCS20_ARATH1.308e-2133.33Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis... [more]
KCS21_ARATH2.309e-1832.693-ketoacyl-CoA synthase 21 OS=Arabidopsis thaliana... [more]
KCS12_ARATH6.507e-1332.263-ketoacyl-CoA synthase 12 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-363 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509855 ID=CF509855; Name=CF509855; organism=Citrus sinensis; type=EST; length=679bp
GTGGTAGCTGGCGGCGGTGCTCCGGTTGGTGTTCGGATCCAACACAATAG
AAGGTTACCCGATTTCTTACAAAGCGTGAATCTTAAGTACGTAAAACTTG
GGTACCATTACCTCATTTCAAATCTATTAACACTATGTTTCATTCCCTTA
ATTATAATCACCTCTATTCAAGTTTCGGAAATGAACATTGATGATCTACG
TCAGTTGTGGATTCACCTTCAGTTCAATCTCGTAAGCGTTGTTATTTGCT
CAGCCATTCTTGTTTTTGGCTTAACGGTTTTTATCATGACTCGGCCAAGA
CCGGTTTATTTAGTTGATTACTCCTGTTACAAACCACCCCATAATCTCAA
AGCCTCGTATGATAAATTCATGGAGCATTCGAAGTTAACAGGGGATTTTG
ATGAGTCCTCTCTCGAGTTCCAGCGCAAGATTCTTGAGCGTTCTGGGCTT
GGAGAGGAGACTTATTTCCCTGAAGCTATGCATGCTATTCCACCTAAGCC
ATCAATGGCTGCTGCCAGAGAAGAGGCTGAGCAGGTCATGTATGGTGCGT
TGGATAACCTTTTTAGTAATACAAATGTTAATCCCAAAGATATTGGTATT
CTTGTTGTCAATTGTAGTTTGTTTAATCCTACACCGTCTTTGTCAGCTAT
GATTGTGAATAAGTATAGACTGCGAGGTA
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