CF509865

Overview
NameCF509865
Unique NameCF509865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.080e-34
Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 379
            IQ++WN NY   G+ALG D L NP+++A    ++F++A+WFWMT +  KPSCH+V++ E++P   DV A R  G+GL TNI+NGG+EC   G+  V NRIGF+  +C   G+  G NLDC +Q+P+
Sbjct:  165 IQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.194e-33
Identity = 65/126 (51.59%), Postives = 86/126 (68.25%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 379
            IQ+++N NY   G+A+GVDLL NPDL+ +D  + FK+A+WFWMT Q PKPS H+VI   W PS+ D  AGR+PGYG+ TNII+GG+ECG      V +RIG++            DNLDC NQ+P+
Sbjct:   85 IQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.659e-33
Identity = 64/127 (50.39%), Postives = 81/127 (63.78%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 379
            +QL WN NY  CG  LG +LL+ P+ +ATDPVLSF++A+WFWM       PSCHEVI  EW PS  D+ AGR PG+G+ TNII  G EC   G    +NRI ++  +C    + PGDNL C NQ  +
Sbjct:  178 LQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.924e-33
Identity = 63/135 (46.67%), Postives = 91/135 (67.41%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQS 403
            +Q+ +N NY   GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+ GG++C   G +   +R+ F+  +C   G+  G NLDC  Q P+  ++M+ S
Sbjct:  205 MQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 7.737e-33
Identity = 63/135 (46.67%), Postives = 90/135 (66.67%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQS 403
            +Q+ +N NY   GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+ GG++C   G +   +R+ F+  +C   G+  G NLDC  Q P+   +M+ S
Sbjct:  205 MQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.977e-20
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 361
            +QL+WN NY   G+A+G D L NP+ +ATD   SFK+A+WFWMT                     +V++    G+G TT  ING +EC     D   +RI F+  +C  FG+ PGDNL C
Sbjct:  190 LQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 1.281e-19
Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGND--AVR-NRIGFFTTFCGKFGIQPGDNL 355
            IQLT N NY   G+A+G DL+ NPDL+  DP++SFK+A+WFWM+    KPSCH++++     +AN   A R+P  G+  NII+        G+D  AVR + IGF+  +C   G+  G +L
Sbjct:  242 IQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.085e-18
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 361
            +Q++WN NY   G+ +G D L +PD +A DP +SFK+A+WFWM                     N+V+   L G+G T   ING +EC      AV  R+ ++  +C +FG+ PG NL C
Sbjct:  190 LQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.850e-18
Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 361
            +QL+WN NY+  G+ L  D LN+PD++  DP++SFK+++WFW+     +     VI+D   P+          G+G T  IINGG EC       +  R+G++  +C + G+ PG+NL C
Sbjct:  148 MQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250          
BLAST of CF509865 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 7.031e-18
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 2
Query:    2 IQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 361
            +Q++WN NY   G+ +G D L +PD +A DP +SFK+A+WFWM                     N+V+     G+G T   ING +EC      AV  R+ ++  +C +FG+ PG NL C
Sbjct:  187 LQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285          
The following BLAST results are available for this feature:
BLAST of CF509865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI10_ORYSJ1.080e-3448.41Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIT_AVESA1.194e-3351.59Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
CHI8_POPTR2.659e-3350.39Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]
CHI7_ORYSJ5.924e-3346.67Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI7.737e-3346.67Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHIP_BETVU1.977e-2040.00Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 P... [more]
AGI_URTDI1.281e-1942.98Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHI5_ORYSJ1.085e-1836.67Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIT_DIOJA1.850e-1836.67Acidic endochitinase OS=Dioscorea japonica PE=1 SV... [more]
CHI4_ORYSJ7.031e-1835.83Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-373 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509865 ID=CF509865; Name=CF509865; organism=Citrus sinensis; type=EST; length=482bp
AATTCAACTCACTTGGAATTGCAATTACTTAAGGTGCGGAGAAGCCTTGG
GGGTGGACTTGTTGAACAATCCAGACCTACTTGCCACTGATCCAGTACTA
TCATTCAAGTCAGCAATCTGGTTCTGGATGACTGCACAGCCACCAAAGCC
ATCGTGCCACGAAGTCATTATCGACGAATGGAAACCATCAGCAAATGACG
TAAACGCCGGCCGGCTTCCGGGATACGGTCTAACCACAAATATAATCAAC
GGTGGAATTGAATGTGGCTACGTTGGGAATGACGCTGTACGTAACCGTAT
TGGGTTCTTTACCACTTTCTGTGGCAAGTTTGGGATTCAGCCTGGTGACA
ATCTTGATTGCTCCAACCAACGGCCTTATGGCCTTAATCTGATGGCACAA
TCTATGTGATCATCATGATCAACGTTTTAGTAAAATAAGCTTAATAAAAG
CTACTTAATAAAAACTTTAGATGTCACACTTG
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