CF509883

Overview
NameCF509883
Unique NameCF509883
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length488
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR1_DROME (Ornithine decarboxylase 1 OS=Drosophila melanogaster GN=Odc1 PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21
Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGS 376
            LA LG+ FDC S++E++ VL   VSP+RII+ANPC+PVSH++YA    V+  TVD+  E+ K+   +P S+L++R KS +   A+ PL  K+G      +   L+  A++  L V G SFHVGS
Sbjct:   73 LAQLGAGFDCASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS-EAKEAQCPLGDKFGC-DADVDAAALMLLAKSLELKVTGTSFHVGS 194          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: AZIN1_MOUSE (Antizyme inhibitor 1 OS=Mus musculus GN=Azin1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21
Identity = 62/161 (38.51%), Postives = 84/161 (52.17%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487
            LAALG+ F C S++E+  V  LGVSP+ II+ +PCK VS IKYAA VGVN+ T D+  EL KI   HP + +L+ I + D+ G +   D     G   +    LL+ A+   + ++GV FHV S                   D A       M +LDIGG
Sbjct:   80 LAALGTGFACSSKNEMALVQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATEDNIGGE---DGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARCVFDMAGEFGFT-MNMLDIGG 236          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_PANRE (Ornithine decarboxylase OS=Panagrellus redivivus GN=ODC PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.402e-21
Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMP-LLKAAEASGLSVVGVSFHVGS 376
            LA LG  FDC S++EIE V+ L V P++I+YANPCK    I +A + GV   T DSVEEL KI+  H    L++RI S  D  A+  L  K+G    P+ + P LL+ A   G++V+G+SFHVGS
Sbjct:   87 LADLGMGFDCASKAEIEKVIGL-VGPEKIVYANPCKTRGFIAHAEAAGVKRMTFDSVEELTKIKQNHADPSLILRI-SVSDPTAQCQLGIKFGC--DPETVAPKLLRKAADMGMNVIGISFHVGS 207          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: AZIN1_RAT (Antizyme inhibitor 1 OS=Rattus norvegicus GN=Azin1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.055e-21
Identity = 60/161 (37.27%), Postives = 83/161 (51.55%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487
            LAALG+ F C +++E+  V  LGVSP+ IIY +PCK  S IKYAA VGVN+ T D+  EL KI   HP + +L+ I + D+ G +   D     G   +    LL+ A+   + ++GV FH+ S                   D A       M +LDIGG
Sbjct:   80 LAALGTGFACSTKNEMALVQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIATEDNIGGE---DGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALSDARCVFDMAGEFGFT-MNMLDIGG 236          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: AZIN1_PONAB (Antizyme inhibitor 1 OS=Pongo abelii GN=AZIN1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.203e-20
Identity = 61/161 (37.89%), Postives = 83/161 (51.55%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487
            LAALG+ F C S++E+  V  LGV P+ IIY +PCK VS IKYAA VGVN+ T D+  EL KI   HP + +L+ I + D+ G +   +     G   +    LL+ A+   + ++GV FHV S                   D A       M +LDIGG
Sbjct:   80 LAALGTGFACSSKNEMALVQELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATEDNIGGE---EGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEIGFT-MNMLDIGG 236          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: AZIN1_HUMAN (Antizyme inhibitor 1 OS=Homo sapiens GN=AZIN1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.203e-20
Identity = 61/161 (37.89%), Postives = 83/161 (51.55%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487
            LAALG+ F C S++E+  V  LGV P+ IIY +PCK VS IKYAA VGVN+ T D+  EL KI   HP + +L+ I + D+ G +   +     G   +    LL+ A+   + ++GV FHV S                   D A       M +LDIGG
Sbjct:   80 LAALGTGFACSSKNEMALVQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIATEDNIGGE---EGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEIGFT-MNMLDIGG 236          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCOR_LEIDO (Ornithine decarboxylase OS=Leishmania donovani PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.270e-19
Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVL--LLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGS 376
            L+ALG+ FDC S+ EI  VL   L  SPD II+ANPCK +  ++ A + GV   TVD+  E++KI    P +  +IRIK+ +DS A+    +K+GA    +++  LL+AA    ++V GVSFHVGS
Sbjct:  299 LSALGAGFDCASKEEIHMVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIRIKT-NDSKAQCSFSTKFGA--PLEDVEGLLEAARQFNVTVCGVSFHVGS 421          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: ADC_HUMAN (Arginine decarboxylase OS=Homo sapiens GN=ADC PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.627e-17
Identity = 56/161 (34.78%), Postives = 84/161 (52.17%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEXXXXXXXXXXXXXXXXXXDTAARTSNNKMRVLDIGG 487
            LA LG  F C +++E+E V  +G+   +II ANPCK ++ IKYAA  G+ L + D+  EL K+   HP + +++ I + DDS +   L  K+G     +    LL+ A+   + VVGVSFH+GS                   +       +KM VLD+GG
Sbjct:   81 LAQLGLGFSCANKAEMELVQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCI-ATDDSHSLSCLSLKFGVS--LKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFEMGTEL-GHKMHVLDLGG 237          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: ADC_MOUSE (Antizyme inhibitor 2 OS=Mus musculus GN=Adc PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17
Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGS 376
            LA LG  F C +++E+E V  +GV   +II ANPCK V+ IKYAA  GV L + D+  EL K+   HP + +++ I + D     + L  ++GA    +    LL+ A+ S + VVGVSFH+GS
Sbjct:   81 LAELGLGFSCANKAEMELVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATQDSHSLNH-LSLRFGAS--LKSCRHLLENAKKSHVEVVGVSFHIGS 201          
BLAST of CF509883 vs. ExPASy Swiss-Prot
Match: DCLO_SELRU (Lysine/ornithine decarboxylase OS=Selenomonas ruminantium GN=ldc PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.732e-17
Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = 2
Query:    5 LAALGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSE 379
            LA LGS+FD  S  E+E +  LGV   ++IYANP K    +K AA   V   T D   E+DK+    P +D+L+RI +  ++ A   L++K+GA    +E + LLKAA+ +GL  +G+ FHVGS+
Sbjct:   62 LAGLGSHFDVASAGEMEILHELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLVRI-AVRNNKALVDLNTKFGA--PVEEALDLLKAAQDAGLHAMGICFHVGSQ 183          
The following BLAST results are available for this feature:
BLAST of CF509883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
DCOR1_DROME3.167e-2144.35Ornithine decarboxylase 1 OS=Drosophila melanogast... [more]
AZIN1_MOUSE3.167e-2138.51Antizyme inhibitor 1 OS=Mus musculus GN=Azin1 PE=1... [more]
DCOR_PANRE5.402e-2147.20Ornithine decarboxylase OS=Panagrellus redivivus G... [more]
AZIN1_RAT7.055e-2137.27Antizyme inhibitor 1 OS=Rattus norvegicus GN=Azin1... [more]
AZIN1_PONAB1.203e-2037.89Antizyme inhibitor 1 OS=Pongo abelii GN=AZIN1 PE=2... [more]
AZIN1_HUMAN1.203e-2037.89Antizyme inhibitor 1 OS=Homo sapiens GN=AZIN1 PE=1... [more]
DCOR_LEIDO2.270e-1944.44Ornithine decarboxylase OS=Leishmania donovani PE=... [more]
ADC_HUMAN1.627e-1734.78Arginine decarboxylase OS=Homo sapiens GN=ADC PE=2... [more]
ADC_MOUSE2.124e-1741.13Antizyme inhibitor 2 OS=Mus musculus GN=Adc PE=2 S... [more]
DCLO_SELRU4.732e-1741.60Lysine/ornithine decarboxylase OS=Selenomonas rumi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-391 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509883 ID=CF509883; Name=CF509883; organism=Citrus sinensis; type=EST; length=488bp
GGCACTTGCAGCTCTTGGCTCAAACTTTGACTGTGGAAGCCGATCCGAGA
TTGAAGCTGTTTTGTTACTAGGTGTTTCACCGGATCGTATCATTTACGCA
AACCCGTGTAAGCCTGTATCTCACATCAAGTATGCTGCGAGTGTTGGCGT
CAACTTGACAACCGTTGACTCAGTAGAGGAGCTCGACAAGATTCGGAACT
GGCATCCGAAATCTGATTTATTGATCAGGATCAAATCCCCGGATGATAGC
GGAGCGAAGTATCCGTTGGATTCCAAATATGGCGCTGGTCATCATCCTCA
GGAAATTATGCCTCTTCTCAAAGCCGCTGAAGCTTCAGGGCTCTCTGTAG
TTGGTGTATCATTCCACGTTGGAAGCGAAGCTACAAACTTTGCTGCATTT
CGCGGAGCCATAGCAGCGGCTAAAGCAGTCTTTGACACAGCCGCTCGCAC
GAGTAACAACAAAATGCGTGTACTAGATATCGGCGGCG
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