CF509887

Overview
NameCF509887
Unique NameCF509887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.275e-22
Identity = 48/125 (38.40%), Postives = 80/125 (64.00%), Query Frame = 3
Query:  141 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR-KTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            GL  ++Y+ TCP+ E+I++  +  ++     +  + LR +FHDC VQ CDAS+LL+  R +  +E +  ++FG+R    + +IK ++E ECP  VSC+D+++L+ RD V   GGP I +  GR+D
Sbjct:   37 GLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKD 161          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.275e-22
Identity = 48/124 (38.71%), Postives = 76/124 (61.29%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L +++Y+  CP+AE+I++        R K  A   LR  FHDC V+ CD S+LL S +   +E++   +  ++ +  ++  K A+ER+CP ++SCAD+L L  RD V  +GGP+ P+  GRRDG
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKND-AERDAVPNLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDG 148          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 5.587e-22
Identity = 49/120 (40.83%), Postives = 72/120 (60.00%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            FY ++CP  E ++++++        + A   LR  FHDC V+ CD S+LLDS   + +EK+   +  +R F ++E +K AVE+ CPG VSCAD+L L  RD V    GP+  +  GRRDG
Sbjct:   28 FYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDG 147          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.297e-22
Identity = 57/122 (46.72%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  153 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            + Y  +CP    I+++QVK+  K     A S +R  FHDC V  CDAS+LLD T    SEK  +     +R F  I+ IK AVE  CPGVVSCADIL L+ RD V   GGP   +  GR+DG
Sbjct:   33 DIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTN---SEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDG 151          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 59/124 (47.58%), Postives = 67/124 (54.03%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            L  NFY   CP A   IK  V     +      S LR  FHDC VQ CDAS+LLD T     EK     +  +R F  I+ IK  VE  CPGVVSCADIL ++ RD VVALGG    +  GRRD
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRD 147          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.245e-21
Identity = 51/120 (42.50%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            FY  +CP+AE I+   V   ++  K+   ++LR  FHDC V+ CDASLL+D      SEK    +  +R +  I+  K  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDG
Sbjct:   26 FYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDG 145          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.123e-21
Identity = 56/120 (46.67%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            FY  +CP+A   IK  V     +      S LR  FHDC VQ CD S+LL+ T     E+  + + G +R F  ++NIK  VE  CPGVVSCADIL ++ RD VVALGGP   +  GRRD
Sbjct:   31 FYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRD 150          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.123e-21
Identity = 53/124 (42.74%), Postives = 71/124 (57.26%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L + FY +TCPQAE I+K  V        N     LR  FHDC V+ CD S+L+++    +SEK      G+R F  +E +K  +E  CPGVVSC+DI+ L+ RD +    GP   + TGRRDG
Sbjct:   26 LEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNG--AISEKNAFGHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDG 147          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.123e-21
Identity = 55/120 (45.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            FY+++CP A+ I++  V   Y      A S LR  FHDC V  CDAS+LLDS+    SEK  + +    R F  I+ IK A+E ECP  VSCAD+L L  RD +V  GGP   +  GRRD
Sbjct:   45 FYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRD 164          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.773e-21
Identity = 54/125 (43.20%), Postives = 70/125 (56.00%), Query Frame = 3
Query:  141 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            G  + FY  TCP+AE I++  V+         A   LR  FHDC VQ CD S+L+       +EK    + G+R +  I++ K  +E  CPGVVSCADIL L+ RD VV  GG    + TGRRDG
Sbjct:   31 GTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPA---TEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDG 152          
The following BLAST results are available for this feature:
BLAST of CF509887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
PER29_ARATH3.275e-2238.40Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER1_ARATH3.275e-2238.71Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER1_ORYSJ5.587e-2240.83Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PERN_ARMRU7.297e-2246.72Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER1_ARAHY9.530e-2247.58Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER44_ARATH1.245e-2142.50Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER70_MAIZE2.123e-2146.67Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER43_ARATH2.123e-2142.74Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER36_ARATH2.123e-2145.83Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER2_ARAHY2.773e-2143.20Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-395 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509887 ID=CF509887; Name=CF509887; organism=Citrus sinensis; type=EST; length=517bp
CTAAACCAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATG
GGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTATCCTTCTCAGCTGT
GTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTA
TGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAA
CAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCT
TAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGC
TTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGC
TTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGA
AAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCG
GTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACA
GGAAGAAGAGATGGTAG
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