CF509887

Overview
NameCF509887
Unique NameCF509887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.830e-20
Identity = 50/120 (41.67%), Postives = 65/120 (54.17%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            FY  TCP A  I++  ++   +       S +R  FHDC V  CDAS+LLD T    SEK    +    R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  GRRD
Sbjct:   36 FYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRD 155          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 6.830e-20
Identity = 50/124 (40.32%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L   FY +TCP AE I+++ V+         A   LR  FHDC V+ CD S+L+        E+    + G+  F  I+  K  +ER CPGVVSCADI+ L+ RD +    GP+  + TGRRDG
Sbjct:   24 LQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGND-DERFAAGNAGVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDG 146          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.920e-20
Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 3
Query:  141 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            G  + FY  TCP+AE I++  V   +      A   LR  FHDC VQ CD S+L+       +E+    +  ++ F  I+N K  +E  CPGVVSCADIL L+ RD V+   G    + TGRRDG
Sbjct:   34 GTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGAN---TERTAGPNLNLQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDG 155          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.920e-20
Identity = 50/121 (41.32%), Postives = 65/121 (53.72%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            FY  TCP A  I++  ++   +       S +R  FHDC V  CD SLLLD T    SEK    +    R F  +++IK A+E  CPG+VSC+DIL L+    V   GGP   +  GRRDG
Sbjct:   37 FYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDG 157          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.920e-20
Identity = 49/121 (40.50%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  153 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            +FY  TCPQ  DI+   +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K A+E+ CP  VSCAD+L ++ ++ +V  GGP   +  GRRD
Sbjct:   27 SFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRD 147          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 8.920e-20
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM--DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L  NFY+ +CP  E I++  V+  +++   TA + LR  FHDC V+ CDAS+LL S     SEK+   D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDG
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASP----SEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDG 148          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.165e-19
Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L  NFY  +C  AE +++  V+             LR  FHDC VQ CDAS+L+       +EK    +  +  F  I+  K A+E  CP  VSCADI+ L+ RD V A GGP + + TGRRDG
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNS---TEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDG 149          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.987e-19
Identity = 51/121 (42.15%), Postives = 68/121 (56.20%), Query Frame = 3
Query:  153 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            +FY  TCPQ  DI    +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE+ CP  VSCAD+L ++ ++ VV  GGP   +  GRRD
Sbjct:   27 SFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRD 147          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.389e-19
Identity = 53/125 (42.40%), Postives = 67/125 (53.60%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTL-SEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            L   FY  TCP    I++  V+   +       S +R  FHDC V  CD SLLLD+   T+ SEK+ +  +   R F  ++NIK AVE  CPGVVSC DIL L+    V   GGP   +  GRRD
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRD 149          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.427e-19
Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L + FY+ +C  AE I+K++V+  + R    A   +R  FHDC V+ CD S+L+DST    +EK+    +  +R F  I++ K  +E  C GVVSCADI+  + RD V   GG    +  GRRDG
Sbjct:   61 LQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDG 185          
The following BLAST results are available for this feature:
BLAST of CF509887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
PER53_ARATH6.830e-2041.67Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER13_ARATH6.830e-2040.32Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER71_ARATH8.920e-2040.80Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER54_ARATH8.920e-2041.32Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER38_ARATH8.920e-2040.50Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER16_ARATH8.920e-2043.75Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER46_ARATH1.165e-1940.32Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER37_ARATH1.987e-1942.15Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER15_IPOBA3.389e-1942.40Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER5_VITVI4.427e-1940.00Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-395 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509887 ID=CF509887; Name=CF509887; organism=Citrus sinensis; type=EST; length=517bp
CTAAACCAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATG
GGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTATCCTTCTCAGCTGT
GTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTA
TGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAA
CAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCT
TAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGC
TTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGC
TTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGA
AAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCG
GTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACA
GGAAGAAGAGATGGTAG
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