CF509887

Overview
NameCF509887
Unique NameCF509887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.860e-17
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGG--PYIPLKTGRRDG 515
            L + FY   C   E+I+ + V   + +  + A + +R  FHDC    CDASLLLD +    SEK+   +  +R +  I++IK AVE+EC  VVSCADI+ L+ RD V    G      + TGR DG
Sbjct:   28 LRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDG 150          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.860e-17
Identity = 50/119 (42.02%), Postives = 64/119 (53.78%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRD 512
            FY  +CP+A   IK  V            S LR  FHDC VQ CDAS+LL      + +  +  +  +R F  I++IK  +E  C   VSCADIL ++ RD VVALGGP   +  GRRD
Sbjct:   27 FYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG----MEQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRD 141          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.143e-17
Identity = 50/120 (41.67%), Postives = 63/120 (52.50%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            +Y   C   E I++  V+  Y  +   A   LR  FHDC VQ CDAS+LL       SE+    +  +R F  IE  K  +E  CP  VSCADIL L+ RD V   GGP+ P+  GR DG
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNLSLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDG 154          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.143e-17
Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK--TLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L  +FY  TCP    I +  ++   +         +R  FHDC V  CD S+LLD+        EKE  ++ G +  F  I++IK A+E  CPGVVSCADIL ++    V   GGP + +  GRRDG
Sbjct:   25 LTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDG 151          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.411e-17
Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR--KTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L  ++Y   CPQ E ++       +K    +A + +R  FHDC V+ CD S+L+++ +  K L+E+E   +  +R   F  I   K  VE  CP +VSC+DIL ++ RD +   GGPY  +K GR DG
Sbjct:   42 LSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDG 169          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.230e-17
Identity = 48/122 (39.34%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  156 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            FY+++CP  E I++  V+  +++   TA + LR  FHDC V+ CDAS+++ S  +   +   D S     F  +   K+AV+    C   VSCADIL L+ R+ VV  GGP  P++ GRRDG
Sbjct:   31 FYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSE--RDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDG 150          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.230e-17
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L   FY  TCP  E I++  V+   K+      + LR  FHDC V  CDAS+++ ST K  +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA GGP   ++ GR DG
Sbjct:   27 LSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDG 154          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.574e-16
Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 3
Query:  153 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            +FY  TCP  E I++  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+ + +  +    F  +   KEAV+    C   VSCADIL ++ RD V   GGP   ++ GRRDG
Sbjct:   30 DFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDG 154          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.581e-16
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 3
Query:  144 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            L  NFY ++CP  E I+K+ V+   K+   T  + LR  FHDC V  CDAS+++ ST    +EK+   +  +    F  +   K+A++    C   VSCADIL L+ RD VVA  GP   ++ GR DG
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDG 154          
BLAST of CF509887 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.814e-16
Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 3
Query:  153 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMR--NFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG 515
            NFY  +CP  E I++  V+   ++   T  + LR  FHDC V  CDAS+++ ST    +EK+ + +  +    F  +   KEA++    C   VSCADIL ++ RD V   GGP   ++ GR DG
Sbjct:   30 NFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDG 154          
The following BLAST results are available for this feature:
BLAST of CF509887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
PER60_ARATH1.860e-1739.68Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER1_HORVU1.860e-1742.02Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER70_ARATH4.143e-1741.67Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER58_ARATH4.143e-1738.58Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER19_ARATH5.411e-1736.72Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER45_ARATH9.230e-1739.34Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER35_ARATH9.230e-1739.06Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER51_ARATH1.574e-1638.40Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER73_ARATH4.581e-1639.06Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER50_ARATH7.814e-1636.80Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-395 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509887 ID=CF509887; Name=CF509887; organism=Citrus sinensis; type=EST; length=517bp
CTAAACCAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATG
GGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTATCCTTCTCAGCTGT
GTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTA
TGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAAGGAA
CAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCT
TAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGC
TTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGC
TTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGA
AAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTTGTCCTGTCCG
GTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACA
GGAAGAAGAGATGGTAG
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