CF509918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 2.605e-72 Identity = 139/211 (65.88%), Postives = 169/211 (80.09%), Query Frame = 2 Query: 26 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAP----SNIKEGQTIVVGGASEA-NTKKPCCSS 643 DY+FKVVLIGDS VGKS LL+RF RNEF L+SK+TIGVEF TRTL ++ RT+KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK +F++V+RWL+ELR HAD NIVIM+IGNK+DL LR V TEDA+ +AERE L F+ETSALE+ NVE AF T+L+EIYRI+SKK+L + E S++ +G IVV G A TK CC S Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 2.880e-71 Identity = 133/207 (64.25%), Postives = 170/207 (82.13%), Query Frame = 2 Query: 17 E*YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 637 E YDYL+K+VLIGDSGVGKSNLLSRFTRNEF LE+KSTIGVEFATRT+Q EG+TIKAQ+WDTAGQERYRAITSAYYRGA+GALLVYD+ K T+++V RW+ ELR++AD NI IM++GNK+DL+HLR V+T++A+ ++E+ L+FIETSAL++ NVE AFQ IL++IY I+S+ S S+G P + +TI++ SE K C Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTG-PQTTIDSNTETIILPTTSEPPAAKSGC 213
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 5.431e-70 Identity = 133/212 (62.74%), Postives = 168/212 (79.25%), Query Frame = 2 Query: 26 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSL----SSGEPAPSNIKEGQTIVVGGASEANTKK-PCCSSS 646 DY+FKVVLIGDS VGKS +L+RF RNEF L+SKSTIGVEF TRTL ++ +T+KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK TF+++ RWL+ELR+HAD NIVI++IGNK DL + R V TEDA+ +AE+EGL F+ETSALEA NVE AF T+L+EIY I++KKSL S G +++ + I+ G A E K+ CC +S Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.210e-69 Identity = 128/210 (60.95%), Postives = 169/210 (80.48%), Query Frame = 2 Query: 26 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPA----PSNIKEGQTIVVGGASEANTKKPCCSS 643 DY+FKVVLIGDS VGKS +L+RF RNEF L+SK+TIGVEF TRTL ++ +++KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK TF+++ RWL+ELR HAD NIVIM+IGNKTDL+ RAV TEDA+ +A++EGL F+ETSA+EA N+E AF T+L+EI+ I++KK+L++ + P+++ + +V G KK CCSS Sbjct: 13 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKACCSS 222
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 3.892e-68 Identity = 126/210 (60.00%), Postives = 167/210 (79.52%), Query Frame = 2 Query: 26 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE----PAPSNIKEGQTIVVGGASEANTKKPCCSS 643 DY+FKVVLIGDS VGK+ +L+RF RNEF L+SK+TIGVEF TRTL ++ +++KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+TK TF+++ RWL+ELR HAD NIVIM+ GNKTDL+ RAV TEDA+ +A++EGL F+ETSA+EA +E AF T+L+EI+ I++KK+L++ E P+++ + +V G KK CCSS Sbjct: 13 DYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 245.358 bits (625), Expect = 1.999e-64 Identity = 115/187 (61.50%), Postives = 155/187 (82.89%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEG 583 YD LFK+VLIGDSGVGKSNLLSRFT+NEF ++SKSTIGVEFATRTL+++G+ IKAQIWDTAGQERYRAITSAYYRGA+GAL+VYD++K +++EN + WL ELR++AD N+ + +IGNK+DL HLRAV TE+++++A+ L F ETSAL + NV+KAF+ +++ IY+ +SK + G+ + + G Sbjct: 10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGNANG 196
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: YPT32_YEAST (GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae GN=YPT32 PE=1 SV=3) HSP 1 Score: 241.506 bits (615), Expect = 2.887e-63 Identity = 121/213 (56.81%), Postives = 163/213 (76.53%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNI-----KEGQTIVVGGASEANTKKP---CC 637 YDYLFK+VLIGDSGVGKSNLLSRFT +EF +ESKSTIGVEFATRT++VE + IKAQIWDTAGQERYRAITSAYYRGA+GAL+VYD++K +++EN + WL ELR++AD N+ + +IGNK+DL HLRAV T++A+++A + F ETSAL + NV+KAF+ ++ I++++SK + +N+ +G TI + A + + KK CC Sbjct: 10 YDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGTNNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 3.192e-62 Identity = 122/212 (57.55%), Postives = 157/212 (74.06%), Query Frame = 2 Query: 8 RPDE*YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 643 R DE Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ + +KAQIWDTAG ERYRAITSAYYRGA+GALLV+D+TK T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A +AE GL F+ETSAL++ NVE AFQT+L EI+ +SK+ +S + + Q G E K+ CC S Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSAITLGNAQAGQDPGPGE---KRACCIS 212
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.529e-61 Identity = 120/212 (56.60%), Postives = 157/212 (74.06%), Query Frame = 2 Query: 8 RPDE*YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCCSS 643 R +E Y+++FKVVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TRT+ + IKAQIWDTAG ERYRAITSAYYRGA+GALLV+D+TK T+ V RWLKEL DHA++ IV+M++GNK+DL R V TE+A+ +AE GL F+ETSAL++ NVE AF+T+L EI+ +SK+ ++ + G G E K+ CC S Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNNARTNAVTLGSGPAGQELGPGE---KRACCIS 212
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.529e-61 Identity = 112/210 (53.33%), Postives = 163/210 (77.62%), Query Frame = 2 Query: 26 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVV---GGASEANTKKPCCSSS 646 +YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++++EG+ +KAQIWDTAGQER+RA+TSAYYRGA+GAL+VYD+T+ TTFE+V RWL EL+ H+D+ + M++GNK DL+++RAV+ E+ ++ AE EGL F+ETSAL++ NV+ AF+ ++ +IY +S+K L+S + + + +V AS+ ++ CCSS+ Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNS-DTYKDELTVNRVSLVKDDNSASKQSSGFSCCSST 218 The following BLAST results are available for this feature:
BLAST of CF509918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509918 ID=CF509918; Name=CF509918; organism=Citrus sinensis; type=EST; length=660bpback to top |