CF509918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 3.545e-45 Identity = 88/171 (51.46%), Postives = 123/171 (71.93%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISK 535 Y +LFK ++IGD+GVGKS LL +FT F TIGVEF R + ++ + IK QIWDTAGQE +R+IT +YYRG+ GALLVYD+T+ TF +++ WLK+ R +A+SN+ I++IGNK+D++ RAV+ E+ + +A+ GL F+ETSA A NVE+AF S+IY I K Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQK 172
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 4.630e-45 Identity = 91/205 (44.39%), Postives = 139/205 (67.80%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTKKPCC 637 YDYLFK++LIG+SGVGKS LL RF+ + + + STIGV+F +T++++G+T+K QIWDTAGQER+R ITS+YYRG+ G ++VYDVT +F V WL+E+ +A S ++ +++GNK DLK R V + A+ +A+ + F+ETSAL++ NVE AF T+ +I +S+++L+ ++ + + G S NT CC Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNE---TTQKKEDKGNVNLKGQSLTNTGGGCC 206
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 4.630e-45 Identity = 96/201 (47.76%), Postives = 132/201 (65.67%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 625 YDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA ++N K Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 4.630e-45 Identity = 96/201 (47.76%), Postives = 132/201 (65.67%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 625 YDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA ++N K Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 4.630e-45 Identity = 96/201 (47.76%), Postives = 132/201 (65.67%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 625 YDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA ++N K Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 4.630e-45 Identity = 96/201 (47.76%), Postives = 132/201 (65.67%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 625 YDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA ++N K Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.047e-45 Identity = 90/178 (50.56%), Postives = 126/178 (70.79%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGE 556 YDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER R ITS+YYRGA G ++VYDVT ++ NV +WL+E+ +A N+ +++GNK+DL + V A+ +A+ G+ F+ETSA A NVE+AF T+ +EI + + + S GE Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGE 182
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 6.047e-45 Identity = 96/201 (47.76%), Postives = 132/201 (65.67%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIVVGGASEANTK 625 YDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+TIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ +A N+ +++GNK DL + V A+ +A+ G+ F+ETSA A NVE++F T+ +EI KK + G A GGA ++N K Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKRMGPGATA------------GGAEKSNVK 191
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.898e-45 Identity = 88/183 (48.09%), Postives = 126/183 (68.85%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSN 571 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++G+ IK QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F+N+ W++ + +HA +++ M++GNK D+ R V+ E + A G+ F+ETSA INVE AF T+ +I + KK L P SN Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKK-LEGNSPQGSN 186
BLAST of CF509918 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.031e-44 Identity = 93/191 (48.69%), Postives = 131/191 (68.59%), Query Frame = 2 Query: 23 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTIKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMMIGNKTDLKHLRAVATEDAQSYAEREGLSFIETSALEAINVEKAFQTILSEIYRIISKKSLSSGEPAPSNIKEGQTIV 595 YDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++++G+ IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +++GNK+DL + V A+++A+ G+ F+ETSA A NVE+AF T+ +EI K+ + +P P+ K G +V Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI------KNRMASQPIPT--KAGGPVV 187 The following BLAST results are available for this feature:
BLAST of CF509918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509918 ID=CF509918; Name=CF509918; organism=Citrus sinensis; type=EST; length=660bpback to top |