CF509940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: TMTC2_MOUSE (Transmembrane and TPR repeat-containing protein 2 OS=Mus musculus GN=Tmtc2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 62/206 (30.10%), Postives = 88/206 (42.72%), Query Frame = 3 Query: 30 RQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPNAIAFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSH--PQALTN-LGNIYMEWNMLPAAASYY 638 R + +NP A NLGN++K+Q + EA S Y AL + A NL L E+ AL YYK A+ +PT AYLN G + G +EA R + + I NL + + + NLG + GR +EA+ Y + + P H PQ+L N +G YM + LP A +Y Sbjct: 485 RSGIKVNP--AKAWGNLGNVLKSQSKISEAESAYRNALFYRSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGKTEEA-----RRTFLKCSEIPDENLKDPHAHKSSVTSCLY-----------------NLGKLYHEQGRYEEALSVYREAIQKMPRHFAPQSLYNMMGEAYMRLSKLPEAEHWY 666
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: TMTC2_HUMAN (Transmembrane and TPR repeat-containing protein 2 OS=Homo sapiens GN=TMTC2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.363e-15 Identity = 62/204 (30.39%), Postives = 90/204 (44.12%), Query Frame = 3 Query: 30 RQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQ------TRPNA------IAFGNLASTYYERGQADMAILYYKQAIGCDPRFL---EAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTNLGNI 596 R + +NP A NLGN++K+Q + EA S Y AL + A NL L E+ AL YYK A+ +PT AYLN G + G +EA + + + P+A NL Y+E+G + A+ YK+AI PR YN +G A + ++ EA Y + L + H A G + Sbjct: 485 RSGIKVNP--AKAWGNLGNVLKSQSKISEAESAYRNALYYRSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGRTEEARRTFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALSVYKEAIQKMPRQFAPQSLYNMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLTYGKL 686
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: TMTC3_DROME (Transmembrane and TPR repeat-containing protein CG4050 OS=Drosophila melanogaster GN=CG4050 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.158e-14 Identity = 59/204 (28.92%), Postives = 91/204 (44.61%), Query Frame = 3 Query: 3 RLNEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPN----AIAFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTNLGNIYM 602 RL EA RQA+++ V A+ N G+++ +A Y +AL A + NL +F+E G +A Y+ +A++L P A LN + + LG + V R + N + NL + D A ++K+AI F A NL L D R +A+ NQ + PSH + L LG+IY+ Sbjct: 612 RLEEADHLYRQAISMRSDYVQAYINRGDILMKLNRTAQAQEVYEQALLYDNENADIYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLNSAILLQELGGEEARRVSRSRLYKVLENDDQNEKVYFNLGMLAMDESSFDEAEQFFKRAIHLKADFRSALFNLALLLADTKRPLDAVPFLNQLIRHHPSHVKGLILLGDIYI 815
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: Y2245_ARATH (Uncharacterized TPR repeat-containing protein At2g32450 OS=Arabidopsis thaliana GN=At2g32450 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 59/200 (29.50%), Postives = 97/200 (48.50%), Query Frame = 3 Query: 12 EAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLA-------GLFMES-GDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPN-AIAFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTN 584 EA ++A L P V H GN + G +E+ +L AL + W+ L G+ +E G + A +YY+EA L PT A LG+ +G + A+ + A+ +P+ A A +LAS+ + G+ + AI +++AI P ++A NLG D+GR A + Y + L++ P+H +A N Sbjct: 247 EALVSFKRACELQPTDVRPHFKAGNCLYVLGKYKESKDEFLLALEAAESGGNQWAYLLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLN 446 HSP 2 Score: 73.1738 bits (178), Expect = 1.327e-12 Identity = 48/168 (28.57%), Postives = 78/168 (46.43%), Query Frame = 3 Query: 54 LLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPNAI-AFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSL 554 LL + NLG ++ +G+V A Y EA + PT A L G+ A++ +EA+ LKP + DA+ +L + A+G + AI +QRA+ +P + A NL Y + G+ A Y + + P A N +L G +EA + + L + Sbjct: 303 LLPQIYVNLGISLEGEGMVLSACEYYREAAILCPTHYRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHAMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRALKEALKM 470
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: Y1515_ARATH (Uncharacterized TPR repeat-containing protein At1g05150 OS=Arabidopsis thaliana GN=At1g05150 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.035e-14 Identity = 59/200 (29.50%), Postives = 97/200 (48.50%), Query Frame = 3 Query: 12 EAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLA-------GLFMES-GDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPN-AIAFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTN 584 EA ++A L P V H GN + G +E+ +L AL + W+ L G+ +E G + A +YY+EA L PT A LG+ +G + A+ + A+ +P+ A A +LAS+ + G+ + AI +++AI P ++A NLG D+GR A + Y + L++ P+H +A N Sbjct: 252 EALVSFKRACELQPTDVRPHFKAGNCLYVLGKCKESKDEFLLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQLN 451 HSP 2 Score: 72.4034 bits (176), Expect = 2.263e-12 Identity = 48/168 (28.57%), Postives = 78/168 (46.43%), Query Frame = 3 Query: 54 LLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPNAI-AFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSL 554 LL + NLG ++ +G+V A Y EA + PT A L G+ A++ +EA+ LKP + DA+ +L + ++G + AI +QRA+ +P + A NL Y + G+ A Y + + P A N +L G +EA + + L L Sbjct: 308 LLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQLNKAVSLLGAGETEEAKRALKEALKL 475 HSP 3 Score: 67.3958 bits (163), Expect = 7.280e-11 Identity = 49/201 (24.38%), Postives = 84/201 (41.79%), Query Frame = 3 Query: 63 DAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPT--------FPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPNAI-AFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTNLGNIYMEWNMLPAAASYY 638 D H +G ++ L +EA + A +QPT G + + A++ + P Y+NLG + GM A Y+ A P A L S + G+ A+ ++AI P + +A+ +L ++L +G + AI+ + + + L+P H AL NLG +YM+ A+ Y Sbjct: 235 DGHMAIGRVLYEHQLFKEALVSFKRACELQPTDVRPHFKAGNCLYVLGKCKESKDEFLLALEAAESGGNQWAYLLPQIYVNLGIALEGEGMVLSACEYYREAAILCPTHFRALKLLGSALFGVGEYRAAVKALEEAIYLKPDYADAHCDLASSLHSMGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMY 435
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: Y270_SYNE7 (TPR repeat-containing protein Synpcc7942_0270 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_0270 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.327e-12 Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 153 PTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFP----DAYLNLGNVYKALGMPQEAIVCYQRAVQTRPNAI----AFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTNLGNIYMEWNMLPAAASYYK 641 P A S L GL ++ GDL A ++ K+ +K P + +L + + G AI YQ A+Q +AI A+ NL+ Y +RGQ +A +QA+ P+ A LG A + +G EAI Y Q L L P+ P NLG + + L A+ + ++ Sbjct: 205 PEDAYLCSKLGGLLVQEGDLKAAQRWLKQGLKQGRPEPAVRYELLYHLALLERRQGDLDAAIDRYQAALQEPVDAIHKLGAWVNLSHLYRDRGQLGLAYDAARQAVAAAPQATVALTALGLAARAIGNYPEAIAAYQQALQLDPNDPSLYQNLGAVLFQVGQLEASYAAFR 375
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: TMTC3_HUMAN (Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens GN=TMTC3 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12 Identity = 50/180 (27.78%), Postives = 82/180 (45.56%), Query Frame = 3 Query: 111 QEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPNAIAFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALK-DVGRVDEAIQCYNQCLSLQPSHPQALTNLGNIYMEWNM-LPAAASYYKA 644 + Y+ ++ AL++ A W+N+ + RAL+Y+ +A ++P A++N+G YK L +EA Y A P I G+ K A P L Y NL N ++ + R++EA Q Y Q +S++P QA + G + ++ N L A +Y KA Sbjct: 429 ESEYTLFMSALKVNKNNAKLWNNVGHALENEKNFERALKYFLQATHVQPDDIGAHMNVGRTYKNLNRTKEAEESYMMAKSLMPQIIP-----------GK--------KYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKA 589
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: TMTC3_MOUSE (Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus GN=Tmtc3 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.860e-12 Identity = 49/180 (27.22%), Postives = 82/180 (45.56%), Query Frame = 3 Query: 111 QEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRPNAIAFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALK-DVGRVDEAIQCYNQCLSLQPSHPQALTNLGNIYMEWNM-LPAAASYYKA 644 + Y+ ++ AL++ A W+N+ + +AL+Y+ +A ++P A++N+G YK L +EA Y A P I G+ K A P L Y NL N ++ + R++EA Q Y Q +S++P QA + G + ++ N L A +Y KA Sbjct: 434 ESEYTLFMSALKVNKNNAKLWNNVGHALENEKNFEKALKYFLQATHVQPDDIGAHMNVGRTYKNLNRSREAEASYMLAKSLMPQIIP-----------GK--------KYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKA 594 HSP 2 Score: 69.3218 bits (168), Expect = 1.916e-11 Identity = 53/197 (26.90%), Postives = 94/197 (47.72%), Query Frame = 3 Query: 30 RQALALNPLLVDAHSNLGNLMKA-QGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQTRP-NAIAFGNLASTYYERGQADMAILYYKQAIGC---DPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTNLGNIYME 605 + A + P ++ + NL NL++A + ++EA Y +A+ ++P F A+ + L ++ +A + Y +A++L D + NL VY L P EA+ + RA++ P + +A N A E G+ + K+ + +P+ Y NLG D + EA + + LQP AL NL +Y + Sbjct: 523 KYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGMLAMDDKKDSEAESWMKKAIKLQPDFRSALFNLALLYSQ 719
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: Y941_METJA (TPR repeat-containing protein MJ0941 OS=Methanocaldococcus jannaschii GN=MJ0941 PE=4 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11 Identity = 57/228 (25.00%), Postives = 95/228 (41.67%), Query Frame = 3 Query: 9 NEAAQCCRQALALNPLLVDAHSNLGNLMKAQGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAV------------QTRPNAIAFGNL--ASTYYERG----QADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTNLGNIYMEWNMLPAAASYY 638 +EA +C +AL + + A ++ G E CY E L P F W A + + G AL A++LKP +A G + K +G +EA+ C+++ + +A +L A Y G + D+A+ Y+K G + +G++DEA++CY + + LQP + +AL + IY + AA YY Sbjct: 114 DEALKCYNKALGIENRFLSAFLLKTICLEFLGEYDELLKCYNEVLTYTPNFVPMWVKKAEILRKLGRYEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREALECFKKLIDELNVKWIDAIRHAVSLMLALDDLKDAERYINIGLEIRKDDVALWYFK----------------GELYERLGKLDEALKCYEKVIELQPHYIKALLSKARIYERQGNIEAAIEYY 325
BLAST of CF509940 vs. ExPASy Swiss-Prot
Match: YRRB_BACSU (TPR repeat-containing protein yrrB OS=Bacillus subtilis GN=yrrB PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.268e-11 Identity = 46/168 (27.38%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 99 QGLVQEAYSCYLEALRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPTFPDAYLNLGNVYKALGMPQEAIVCYQRAVQT-RPNAIAFGNLASTYYERGQADMAILYYKQAIGCDPRFLEAYNNLGNALKDVGRVDEAIQCYNQCLSLQPSHPQALTNLGNIY 599 +G ++A + +A+ AI + N A L +L RAL +Y +A++L + AY GNVY M +EA +++A++ N F L + + Q +A+ Y ++A+ + EA G L + G +DEA+ + P H A N G Y Sbjct: 3 EGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTY 170 The following BLAST results are available for this feature:
BLAST of CF509940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509940 ID=CF509940; Name=CF509940; organism=Citrus sinensis; type=EST; length=649bpback to top |