CF509944

Overview
NameCF509944
Unique NameCF509944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 3
Query:  258 PHGVLNNWDEDSVDPCSWAMITC-SPENLVIGLGAPSQSLSGTL-SGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            PH     W+E S   C+W  + C S ++ +  L  P   L G + SGS+G LT LR + L++N +SG IP    +L  L++L L +N  SG  P SF QLN+L  L +++N+ +
Sbjct:   40 PHENRLQWNE-SDSACNWVGVECNSNQSSIHSLRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFT 152          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 3
Query:  225 ALVSIKRALND-PHGVLNNWDEDSVD--PCS--WAMITCSPE-NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            AL+S+ +  +  P  V + W E++ +  PC+  W  + C    N+V  L   +  LSG L   IG L +L  + L  N+ SG +P  LG+   L+ LDLSNN  SG +P  FG L +L +L L+ N+LS
Sbjct:   33 ALLSLLKHFDKVPLEVASTWKENTSETTPCNNNWFGVICDLSGNVVETLNLSASGLSGQLGSEIGELKSLVTLDLSLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFLYLDRNNLS 161          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 3
Query:  216 EVDALVSIKRALNDPHGVLNNWDEDSVDPC--SWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSL 590
            +  AL  +  ++N P G L+ W     DPC  +W  ITCS    V  +  PS  LSG+L   +  LT++ +  + NNN+ G +P QL   P L+ L+L+NN+ +G    S   +  L+YL L +N L
Sbjct:   31 DTSALNIMFSSMNSP-GQLSQWTASGGDPCGQNWKGITCSGSR-VTQIKLPSLGLSGSLGFMLDKLTSVTEFDMSNNNLGGDLPYQLP--PNLERLNLANNQFTGSAQYSISMMAPLKYLNLAHNQL 153          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 46/124 (37.10%), Postives = 62/124 (50.00%), Query Frame = 3
Query:  225 ALVSIKRALNDPHGVLNNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGTL-SGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            AL+S + A+    G    WD     PC+W  + C     V  L  P ++LSG +  G  GNLT LR + L+ N ++G +P  LGS   L+ L L  NR SG IP     L++L  L L  N  S
Sbjct:   37 ALLSFRSAVG---GRTLLWDVKQTSPCNWTGVLCDGGR-VTALRLPGETLSGHIPEGIFGNLTQLRTLSLRLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFS 156          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 44/114 (38.60%), Postives = 55/114 (48.25%), Query Frame = 3
Query:  258 PHGVLNNW--DEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            P  V + W  +     PC+W  ITC     V  L      +SG L   IG L +L+ + L  NN SG IP  LG+  KL TLDLS N  S  IP +   L  L+ L L  N L+
Sbjct:   47 PPQVTSTWKINASEATPCNWFGITCDDSKNVASLNFTRSRVSGQLGPEIGELKSLQILDLSTNNFSGTIPSTLGNCTKLATLDLSENGFSDKIPDTLDSLKRLEVLYLYINFLT 160          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.210e-12
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 3
Query:  342 VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            +I L   +  L+G++  S+GNL NL  + L  N ++G IPP+LG++  +  L L+NN+L+G IP SFG L +L YL L  N L+
Sbjct:  320 MIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLTGVIPPELGNMESMIDLQLNNNKLTGSIPSSFGNLKNLTYLYLYLNYLT 403          

HSP 2 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 3
Query:  351 LGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            L      L+G++  S+GNL NL  + L  N ++GGIPP+LG++  +  L+LSNN+L+G IP S G L +L  L L  N L+
Sbjct:  275 LALSQNKLTGSIPSSLGNLKNLTLLSLFQNYLTGGIPPKLGNIESMIDLELSNNKLTGSIPSSLGNLKNLTILYLYENYLT 355          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 44/132 (33.33%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  204 PRNHEVDALVSIKRALNDPHGVLNNWDEDSVDPCSWAMITCS-PENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQN-NNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            P++ +V  L+ IK+AL++P+ +L +W+ ++ D C W  + C    + +  L   S  LSG +  ++G+L  L  ++ +  +N++G IPP +  L  L+ + LS   LSG +P  F +L +L YL L+ N+LS
Sbjct:   32 PKDKKV--LLQIKKALDNPY-ILASWNPNT-DCCGWYCVECDLTTHRINSLTIFSGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLS 159          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 3
Query:  300 PCSWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNS 587
            P S A ++ +  +L +G       +SGT+   IGNL +L+++ L+ N +SG +P   G L  LQ +DL +N +SG IP  FG +  LQ L LN+NS
Sbjct:  361 PASIANLSTTLTSLFLG----QNLISGTIPHDIGNLVSLQELSLETNMLSGELPVSFGKLLNLQVVDLYSNAISGEIPSYFGNMTRLQKLHLNSNS 452          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 46/155 (29.68%), Postives = 70/155 (45.16%), Query Frame = 3
Query:  210 NHEVDALVSIKRALNDPHGVLNNW-DEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQ------------------LGSLPK--------LQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            N +   L   K  L+DP   L++W D + V PC W  ++C   + V+ +   S  L G     + +L +L  + L NN+I+G +                     +GS+PK        L+ L++S N LS  IP SFG+   L+ L L  N LS
Sbjct:   22 NQDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSCDATSNVVSVDLSSFMLVGPFPSILCHLPSLHSLSLYNNSINGSLSADDFDTCHNLISLDLSENLLVGSIPKSLPFNLPNLKFLEISGNNLSDTIPSSFGEFRKLESLNLAGNFLS 176          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.740e-11
Identity = 49/148 (33.11%), Postives = 69/148 (46.62%), Query Frame = 3
Query:  228 LVSIKRALNDPHGVLNNWDEDSVDPCSWAMITCSP-----ENLVIGLGAPS---------------------QSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            L+ IK+A  DP+ VL +W  D+ D C W  +TC        +L I  G  S                      +L+G +  +I  L  L+ + L   N+SG +P  L  L  L  LDLS N L+G IP S  +L +L  LRL+ N L+
Sbjct:   35 LLQIKKAFGDPY-VLASWKSDT-DCCDWYCVTCDSTTNRINSLTIFAGQVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLT 180          
The following BLAST results are available for this feature:
BLAST of CF509944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
Y2267_ARATH2.478e-1237.72Probable inactive receptor kinase At2g26730 OS=Ara... [more]
PEPR2_ARATH2.478e-1237.21Leucine-rich repeat receptor-like protein kinase P... [more]
SRF7_ARATH4.227e-1235.43Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
RLK90_ARATH4.227e-1237.10Probable inactive receptor kinase RLK902 OS=Arabid... [more]
PEPR1_ARATH4.227e-1238.60Leucine-rich repeat receptor-like protein kinase P... [more]
Y1571_ARATH7.210e-1242.86Probable leucine-rich repeat receptor-like protein... [more]
PGIP_VITVI1.606e-1133.33Polygalacturonase inhibitor OS=Vitis vinifera GN=p... [more]
EFR_ARATH1.606e-1139.58LRR receptor-like serine/threonine-protein kinase ... [more]
RLK5_ARATH2.740e-1129.68Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
PGIP_PYRCO2.740e-1133.11Polygalacturonase inhibitor OS=Pyrus communis GN=P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-456 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509944 ID=CF509944; Name=CF509944; organism=Citrus sinensis; type=EST; length=593bp
TGATTTTTGCCTAGGCAGTTCAGTTTCATGTTGTGTTTGTGAAACAAAGT
TTGTTCATTTATTGATTCAATGATATCACAATACCACCAGCTCTATAGCT
TTACTTACCGGCTAGCTTTCTAAATACCATGGCTATCTTCAAGCTCTTTC
TTCTCTTCTTCTTCTTTCTTTCCTTTTTCTCTCTTGCTACTCTCTCTTAT
GAGCCTAGAAACCATGAAGTGGATGCTTTGGTGAGCATAAAGAGAGCATT
GAATGATCCTCACGGAGTGTTAAACAACTGGGATGAAGACTCTGTGGATC
CTTGTAGTTGGGCTATGATAACTTGCTCGCCTGAGAATCTTGTTATAGGC
CTGGGAGCACCAAGCCAGTCTCTTTCTGGAACTTTGTCCGGATCAATAGG
AAATCTCACCAATCTTCGCCAAGTATTATTGCAAAACAACAACATTTCTG
GTGGAATCCCACCTCAGCTTGGCTCTCTTCCAAAACTTCAAACTTTGGAT
CTCTCAAACAACAGACTCTCTGGTGTAATCCCACGCTCTTTTGGGCAATT
GAATAGTCTTCAATATCTGAGGCTCAACAACAATAGCTTGAGT
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