CF509965

Overview
NameCF509965
Unique NameCF509965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length420
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 4.966e-23
Identity = 53/107 (49.53%), Postives = 69/107 (64.49%), Query Frame = 3
Query:  102 PLVPAIITFGDSAVDVGNNNY-LATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLT 419
            PL PAI+ FGDS VD GNNNY L T+F+A + PYG D  + +  GRF NGKL +D  A  L  K + P +L P  + +++L G  FASAG+GYDD TS    AI ++
Sbjct:   31 PLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVS 137          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.966e-23
Identity = 53/107 (49.53%), Postives = 69/107 (64.49%), Query Frame = 3
Query:  102 PLVPAIITFGDSAVDVGNNNY-LATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLT 419
            PL PAI+ FGDS VD GNNNY L T+F+A + PYG D  + +  GRF NGKL +D  A  L  K + P +L P  + +++L G  FASAG+GYDD TS    AI ++
Sbjct:   31 PLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVS 137          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.445e-22
Identity = 55/103 (53.40%), Postives = 65/103 (63.11%), Query Frame = 3
Query:   81 GYAQDAAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRT 389
            G ++D  PL PA   FGDS VD GNNNY+ TL +ANY PYG DF    PTGRFCNG+   D+ A  LG     P YLSP + G+N L G N+ASA +G  D T
Sbjct:   19 GQSRDHQPLAPAFFVFGDSLVDSGNNNYIPTLARANYFPYGIDF--GFPTGRFCNGRTVVDYGATYLGL-PLVPPYLSPLSIGQNALRGVNYASAAAGILDET 118          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.445e-22
Identity = 51/104 (49.04%), Postives = 67/104 (64.42%), Query Frame = 3
Query:  105 LVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            ++PA+I FGDS VD G NN + T+ K ++ PYG +F +   TGRFC+G++  D  A+ LG K+  PAYL P    K+LL G +FAS GSGYD  T  L   ISL
Sbjct:   40 IIPAVIAFGDSIVDTGMNNNVKTVVKCDFLPYGINFQSGVATGRFCDGRVPADLLAEELGIKSIVPAYLDPNLKSKDLLTGVSFASGGSGYDPITPKLVAVISL 143          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.887e-22
Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 3
Query:  111 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS 392
            PA+I FGDS VD GNNN ++T+ K+N+ PYGRD+ + + TGRF NG++A DF ++ LG K   PAYL P     +   G  FASAG+G D+ TS
Sbjct:   28 PALIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGTGLDNATS 121          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.204e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  108 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISV 130          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.204e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  108 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISV 130          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL56_ARATH (GDSL esterase/lipase At3g43570 OS=Arabidopsis thaliana GN=At3g43570 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.171e-22
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  108 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ +G     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKIGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISV 130          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 7.171e-22
Identity = 50/103 (48.54%), Postives = 64/103 (62.14%), Query Frame = 3
Query:  108 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            +PA+  FGDS  D GNNN L T  K+NY PYG DF     TGRF NG +A+D+ A  +G K   PAYL P+    +LL G +FAS G+GY+  TS   +AI +
Sbjct:  202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAGYNPTTSEAANAIPM 304          
BLAST of CF509965 vs. ExPASy Swiss-Prot
Match: GDL55_ARATH (GDSL esterase/lipase At3g43550 OS=Arabidopsis thaliana GN=At3g43550 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.365e-22
Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 3
Query:  108 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISL 416
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P     +LL G  FAS G+GYD  T+ +   IS+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLVKTLPAYMNPYLKPHDLLKGVTFASGGTGYDPLTAKIMSVISV 130          
The following BLAST results are available for this feature:
BLAST of CF509965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
GDL44_ARATH4.966e-2349.53GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
GDL43_ARATH4.966e-2349.53GDSL esterase/lipase At2g31540 OS=Arabidopsis thal... [more]
GLIP7_ARATH1.445e-2253.40GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
EXL3_ARATH1.445e-2249.04GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
GDL66_ARATH1.887e-2251.06GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL26_ARATH4.204e-2246.60GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH4.204e-2246.60GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
GDL56_ARATH7.171e-2245.63GDSL esterase/lipase At3g43570 OS=Arabidopsis thal... [more]
APG_ARATH7.171e-2248.54Anter-specific proline-rich protein APG OS=Arabido... [more]
GDL55_ARATH9.365e-2246.60GDSL esterase/lipase At3g43550 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-479 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509965 ID=CF509965; Name=CF509965; organism=Citrus sinensis; type=EST; length=420bp
GCTTAATGAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTG
CTTGCATTTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGC
ACCACTTGTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTG
GAAACAACAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTAT
GGAAGGGACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAA
ATTAGCCACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGC
CAGCATATCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCC
AACTTTGCTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAA
TCATGCAATTTCATTGACTC
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