CF509990

Overview
NameCF509990
Unique NameCF509990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_YERP3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.147e-43
Identity = 93/202 (46.04%), Postives = 124/202 (61.39%), Query Frame = 2
Query:   41 LEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            L+ +V    L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I + +  QE L +DVLVHGE ERNDMVEYFGE L  F FT N
Sbjct:  308 LQPLVNSRPLWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKQAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQN 509          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_SERP5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Serratia proteamaculans (strain 568) GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.147e-43
Identity = 94/202 (46.53%), Postives = 124/202 (61.39%), Query Frame = 2
Query:   41 LEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKAL--AGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            L+ +VG   L + TSCSLLH+ +DL  E +LD+E+KSW AFA QK  E+  L+ AL   G   +    A +A   +R+ S RV N +V +  AA+   D  R    + R  AQ+++ NLP  PTTTIGSFPQT E+R +R ++K  ++    Y  SI E I + +  QE L +DVLVHGE ERNDMVEYFGE L  F FT N
Sbjct:  308 LQPLVGSRPLWIGTSCSLLHSPIDLSVETRLDEEVKSWFAFALQKCGELALLSAALNAPGAAKQAELDAYSAPIRARRQSSRVHNAQVGQRLAAITAQDSERQRPYAERAQAQRERFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGNNYRTSISEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGENLDGFVFTQN 509          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.147e-43
Identity = 95/198 (47.98%), Postives = 118/198 (59.60%), Query Frame = 2
Query:   56 GKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKAL---AGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            GK  L + TSCSLLH+ +DL  E KLDDE+KSW AFA QK  EV  LAKAL    G+ DE     +A  +  R+ S RV N +V     A+   D  R +    R   Q+ + N P+ PTTTIGSFPQT E+R VR ++K  +I    Y  +I E I + +  QE L +DVLVHGE ERNDMVEYFGE    + FT N
Sbjct:  313 GKRPLWIGTSCSLLHSPIDLSAETKLDDEVKSWFAFAVQKCAEVALLAKALNAPEGEYDEQLAQYSAPIR-QREHSSRVHNAKVAARLQAINAQDGERTSPYQQRAKVQRARFNFPLWPTTTIGSFPQTTEIRTVRLDFKKGRIDTTAYRTNISEHIKQAIDEQERLGLDVLVHGEAERNDMVEYFGEHFEGYVFTQN 509          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_PELCD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.147e-43
Identity = 96/212 (45.28%), Postives = 128/212 (60.38%), Query Frame = 2
Query:    5 NDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            ++L  ++S  +      G D+++++ SCSLLH  VDL  E  LD  I+SWLAFA QK  EVN +  AL G+       AN  A  +R+ S  V  + V++  A +    + R ++   R   QQ  L LP LPTTTIGSFPQ   +R  RR +K  +ISEE+Y A ++  I + +  QE L +DVLVHGEPERNDMVEYFGEQL+ F FT N
Sbjct:  298 SNLRQAISTAQDAVVARGSDRVMIAPSCSLLHVPVDLAGEAVLDPRIRSWLAFARQKCQEVNVVRLALDGEDVTEVLQANDTAMENRRKSALVHRDAVRRRMADISPDMYCRRSSFEER-KKQQAWLRLPTLPTTTIGSFPQVAGVRSARRSFKQGRISEEQYRAEMQRYIREAIAQQEALGLDVLVHGEPERNDMVEYFGEQLAGFCFTEN 508          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.416e-43
Identity = 98/212 (46.23%), Postives = 133/212 (62.74%), Query Frame = 2
Query:    8 DLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAA---QASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFT 634
            DL  +L+ L+      G D L V+ SCSLLH+ VDL  E++LD E+K WLAFA QK  E+  L+ AL   +      A A +   QASR  S RV N +VQ   A++  +DH+R +  + R+  Q+++L LP  PTTTIGSFPQT  +R  R+ +K  K+S  +Y  +++ EI   V++QE L +DVLVHGE ERNDMVEYF EQL  + FT
Sbjct:  308 DLDNALAALQQAHARFG-DNLWVAGSCSLLHSPVDLNREDRLDPELKGWLAFAVQKSREIAILSHALNDPEATEVVEALAQSCEIQASRAQSSRVHNPQVQARLASVTAADHQRRSAFAERITVQRERLKLPAFPTTTIGSFPQTSAIRLARQAHKQGKLSLNDYTDAMRHEIRHAVQVQENLGLDVLVHGEAERNDMVEYFAEQLDGYLFT 518          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.416e-43
Identity = 95/200 (47.50%), Postives = 123/200 (61.50%), Query Frame = 2
Query:   41 LEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            ++ +VGK +L V++SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L  AL           +A  QA R+ S RV N  V+K  AA+   D +RA+    R  AQ+++ NLP  PTTTIGSFPQT E+R +R ++K   +    Y   I E I + +  QE L +DVLVHGE ERNDMVEYFGE L  F FT N
Sbjct:  308 IKDLVGKRELWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCGELALLRDALNSGDTAAITEWSAPIQA-RRHSTRVHNAEVEKRLAAITAQDSQRASPYEVRAQAQRQRFNLPKWPTTTIGSFPQTTEIRGLRLDFKKGNLDASHYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFIFTQN 506          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.073e-43
Identity = 93/202 (46.04%), Postives = 123/202 (60.89%), Query Frame = 2
Query:   41 LEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            L+ +V    L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L  F FT N
Sbjct:  308 LQPLVNSRPLWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQN 509          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.073e-43
Identity = 93/202 (46.04%), Postives = 123/202 (60.89%), Query Frame = 2
Query:   41 LEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            L+ +V    L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L  F FT N
Sbjct:  308 LQPLVNSRPLWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQN 509          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.073e-43
Identity = 93/202 (46.04%), Postives = 123/202 (60.89%), Query Frame = 2
Query:   41 LEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            L+ +V    L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L  F FT N
Sbjct:  308 LQPLVNSRPLWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQN 509          
BLAST of CF509990 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.073e-43
Identity = 93/202 (46.04%), Postives = 123/202 (60.89%), Query Frame = 2
Query:   41 LEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSSFAFTAN 640
            L+ +V    L + +SCSLLH+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L +DVLVHGE ERNDMVEYFGE L  F FT N
Sbjct:  308 LQPLVNSRPLWLGSSCSLLHSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQN 509          
The following BLAST results are available for this feature:
BLAST of CF509990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_YERP34.147e-4346.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SERP54.147e-4346.535-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PROMH4.147e-4347.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PELCD4.147e-4345.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSESM5.416e-4346.235-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP75.416e-4347.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP7.073e-4346.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN7.073e-4346.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE7.073e-4346.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPA7.073e-4346.045-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-504 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509990 ID=CF509990; Name=CF509990; organism=Citrus sinensis; type=EST; length=642bp
GGCCAATGATCTTGCTGCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTG
TTGTTGGCAAAGACAAGCTTGTGGTCTCCACCTCCTGCTCACTTCTTCAC
ACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGATGAAATCAAGTC
ATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCA
AGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCTGCCAATGCTGCA
GCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAATGAGAGAGTTCA
AAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGACGTGCTACAAACG
TTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAATCTTCCAATCCTC
CCAACCACCACAATTGGATCCTTCCCACAAACCATTGAACTTAGGAGAGT
CCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAGAATATGTTGCTT
CCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAAGAAGAGCTTGAT
ATTGATGTCCTTGTCCATGGAGAGCCTGAGAGGAACGACATGGTTGAGTA
CTTTGGAGAGCAATTATCAAGTTTCGCCTTCACTGCCAATGG
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