CF510001

Overview
NameCF510001
Unique NameCF510001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 61/145 (42.07%), Postives = 92/145 (63.45%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVKR       ++E+F+NEV +L+++ H+N+V L GC    ++  +LVYE++ NG +  +LH     +   +TW +R+ IAIE A AL+Y+H++    I HRD+KT NILLD  +  KV+DFG SR   +  TH++T   GT GY
Sbjct:  458 AVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLG-TEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGY 601          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.271e-25
Identity = 60/144 (41.67%), Postives = 92/144 (63.89%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+        +E+F+NE+ +L+++ H+N+V + GC    ++  +LVYEF+ N  + D LH   ++   ++W +R+ IA E A AL+YLH++    I HRDVK+ NILLD     KV+DFG+SR   +D TH++T  QGT GY
Sbjct:  416 AVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLE-TEVPILVYEFIPNRNLFDHLHNP-SEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGY 557          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.211e-24
Identity = 62/144 (43.06%), Postives = 87/144 (60.42%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH---ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+KRLY+     + +F  E+E +  +RH+N+VSL G     + G LL Y+++ NG++ D LHG   K   L W  R+ IA+  A  LAYLH      IIHRD+K++NILLD NF   ++DFG+++  P   TH ST   GT GY
Sbjct:  674 AIKRLYNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPT-GNLLFYDYMENGSLWDLLHGS-LKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGY 815          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.581e-24
Identity = 63/145 (43.45%), Postives = 94/145 (64.83%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGY 425
            AVKR    + + + +F++E+ IL+++RH++LVSL G     S+ ++LVYE++  G +   L+G  + +  L+W  R+ + I  A  L YLH      IIHRD+K+ NILLD+N+  KVADFGLSR  P +D THVST  +G+ GY
Sbjct:  515 AVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSE-MILVYEYMDKGPLKSHLYG--STNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGY 656          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.581e-24
Identity = 67/145 (46.21%), Postives = 92/145 (63.45%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDV-THVSTAPQGTPGY 425
            AVK L + + +  ++F +EVE+L R+ H NL +L G      Q + L+YEF+ANG +AD L G + +H  L+W  R+ IA++ A  L YLH      I+HRDVKT+NILL+     K+ADFGLSR F  +  +HVST   GTPGY
Sbjct:  595 AVKLLSETSAQGFKEFRSEVEVLVRVHHVNLTALIGYFHEGDQ-MGLIYEFMANGNMADHLAG-KYQH-TLSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGY 736          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.581e-24
Identity = 66/146 (45.21%), Postives = 87/146 (59.59%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGY 425
            AVK L  ++ +  + F  EV++L R+ H NLVSL G C  R    L L+YEF+  G +   L G ++    + W  R+ IA+E A  L YLH+     I+HRD+KT NILLD     K+ADFGLSR FP+   TH+ST   GTPGY
Sbjct:  605 AVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDER--DHLALIYEFLPKGDLRQHLSG-KSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGY 747          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 2.697e-24
Identity = 60/144 (41.67%), Postives = 91/144 (63.19%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA---SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+    +  ++E+F+NEV IL+++ H+++V L GC    ++   LVYEF+ NG +   +H +   +   TW +R+ IA++ A AL+YLH+   S I HRD+K+ NILLD  +  KV+DFG SR   +D TH +T   GT GY
Sbjct:  477 AVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLE-TEVPTLVYEFIPNGNLFQHIHEESDDY-TKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGY 618          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.697e-24
Identity = 64/145 (44.14%), Postives = 93/145 (64.14%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGY 425
            A+KR    + + V +F  E+E+L++LRH++LVSL G      + ++LVY+++A+GT+ + L+  + ++  L W  R+ I I  A  L YLH      IIHRDVKT NILLD  +  KV+DFGLS+  P LD THVST  +G+ GY
Sbjct:  563 AIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCE-MILVYDYMAHGTMREHLY--KTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGY 704          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.697e-24
Identity = 65/144 (45.14%), Postives = 88/144 (61.11%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+L +   +   +FM E+E L +++H NLVSL G  S +S+  LLVYE++ NG++   L        +L W  R+ IA+  A  LA+LH      IIHRD+K +NILLD +F  KVADFGL+RL     +HVST   GT GY
Sbjct:  943 AVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCS-FSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGY 1085          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.523e-24
Identity = 65/145 (44.83%), Postives = 92/145 (63.45%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGY 425
            AVK+   N+ + + +F  E+E+L+RLRHK+LVSL G      + + LVY+++A GT+ + L+    K   LTW  R+ IAI  A  L YLH      IIHRDVKT NIL+D N+  KV+DFGLS+  P ++  HV+T  +G+ GY
Sbjct:  543 AVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGE-MCLVYDYMAFGTLREHLYN--TKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGY 684          
The following BLAST results are available for this feature:
BLAST of CF510001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
WAKLF_ARATH5.435e-2542.07Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
WAKLG_ARATH9.271e-2541.67Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
ERL1_ARATH1.211e-2443.06LRR receptor-like serine/threonine-protein kinase ... [more]
Y5241_ARATH1.581e-2443.45Probable receptor-like protein kinase At5g24010 OS... [more]
Y1570_ARATH1.581e-2446.21Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH1.581e-2445.21Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH2.697e-2441.67Putative wall-associated receptor kinase-like 11 O... [more]
FERON_ARATH2.697e-2444.14Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
EXS_ARATH2.697e-2445.14Leucine-rich repeat receptor protein kinase EXS OS... [more]
ANX1_ARATH3.523e-2444.83Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-516 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510001 ID=CF510001; Name=CF510001; organism=Citrus sinensis; type=EST; length=426bp
TTGCAGTCAAGCGCCTATATGACAACAACTACAGAAGGGTTGAACAATTT
ATGAATGAAGTTGAAATCCTCACACGTTTGCGCCACAAAAATCTTGTCTC
CCTTTTTGGCTGCACCTCTCGTTACAGTCAGGGTCTCCTACTTGTGTATG
AATTTGTTGCCAATGGCACTGTTGCGGATCAACTCCATGGTGATCGAGCT
AAGCATGGTTTGCTGACATGGCCTATCCGTATGAACATTGCCATAGAAAC
TGCCAGTGCATTGGCATATCTTCATGCTTCTGATATCATTCATCGTGATG
TGAAGACTAACAACATTCTCCTTGACAGCAATTTTTGTGTCAAAGTTGCA
GATTTTGGGCTTTCGCGATTGTTCCCTTTAGATGTTACTCACGTCTCAAC
TGCACCACAAGGAACTCCAGGCTATG
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