CF510039

Overview
NameCF510039
Unique NameCF510039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length345
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.401e-23
Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 1
Query:   91 EGSPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFE 345
            + S S AQL P FY  TCP + NII D +     +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NS RGF+
Sbjct:   23 QASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFD 107          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.401e-23
Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 1
Query:   97 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGF 342
            S S AQL+P+FY ++CPNV NI+ D++     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF
Sbjct:   24 SLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGF 105          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.433e-22
Identity = 51/83 (61.45%), Postives = 61/83 (73.49%), Query Frame = 1
Query:   97 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFE 345
            S S AQLSPSFY  TCP V +I  + +K A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N  SARGF+
Sbjct:   20 SLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFD 102          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.871e-22
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 1
Query:  112 QLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGF 342
            QL P FYS TCP+V NII++V+     +D RI AS++RLHFHDCFV GCDASILLD++ +  +EK AAPN NSARGF
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGF 77          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.444e-22
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 1
Query:   97 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFE 345
            S S AQLSPSFY  TCP V +I    +  A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFD 100          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.444e-22
Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query:  103 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGF 342
            S AQL+P+FY ++CPNV NI+ D++     SD  I AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF
Sbjct:    7 SNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGF 86          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.192e-22
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 1
Query:  103 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFE 345
            S   L P FY  +CP    I++ ++ KAF  D R+ ASL+RLHFHDCFV GCDASILLDS+ TI SEK + PN NSARGFE
Sbjct:   29 SGGYLFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFE 109          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.192e-22
Identity = 45/79 (56.96%), Postives = 64/79 (81.01%), Query Frame = 1
Query:  106 QAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGF 342
            +AQL+ +FYS++CPN+L+ ++  +K A +S+ R+GAS++RL FHDCFV+GCD SILLD T++   E+ AAPN NSARGF
Sbjct:   27 EAQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGF 105          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.192e-22
Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 1
Query:   97 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGF 342
            S S AQL+P+FY  +CPNV NI+ + +     SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGF 107          
BLAST of CF510039 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.169e-22
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 1
Query:   91 EGSPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGF 342
            + S S AQL P FY  TCP V +II +++     +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NSARGF
Sbjct:   23 QASNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGF 106          
The following BLAST results are available for this feature:
BLAST of CF510039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PER23_ARATH8.401e-2358.82Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER1B_ARMRU8.401e-2360.98Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER2_ARMRU1.433e-2261.45Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PERE5_ARMRU1.871e-2263.64Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER37_ARATH2.444e-2261.45Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER1C_ARMRU2.444e-2260.00Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER72_ARATH3.192e-2260.49Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER52_ARATH3.192e-2256.96Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER34_ARATH3.192e-2259.76Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER22_ARATH4.169e-2259.52Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-554 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510039 ID=CF510039; Name=CF510039; organism=Citrus sinensis; type=EST; length=345bp
ATTCTCTTCATAGAGAAGTAGTAACTCTTAGCCAAAATGGCTTCACTTCG
TTATCTTCTTGCAGCAGCTCTTGTTGTTGCTTTTGTGCTTGAGGGATCAC
CATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAAT
GTATTGAACATTATCGAGGATGTGCTTAAGAAAGCGTTCTCGTCCGATAT
CCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTG
ATGGGTGTGATGCTTCGATTTTGCTGGACAGCACTAACACCATAGACAGC
GAGAAATTTGCTGCGCCAAATAATAATTCGGCGAGGGGTTTTGAA
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