CF510057

Overview
NameCF510057
Unique NameCF510057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIP3_YEAST (Kinesin-like protein KIP3 OS=Saccharomyces cerevisiae GN=KIP3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = 2
Query:   95 LSALGDVISALA----QKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARS------------------NKESGEIRELREEISNLKQTLEKKEAELEQL 412
            L ALG+ I+AL      +S HIPYR+SKLT++L+ SLGG+ KT+M V I+P  +   ET++TLK+A R   I+    R+                   ++  E+RE  E++ +LK T  K   E  QL
Sbjct:  367 LLALGNCINALCLNDGSRSCHIPYRDSKLTRLLKFSLGGNCKTVMIVCISPSSSHYDETLNTLKYANRAKEIKTKIIRNQQSLSRHVGSYLKMITEQKRQIEELREREEKMISLKLTKYKLNKEKIQL 494          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: DSK1_CYLFU (Diatom spindle kinesin 1 OS=Cylindrotheca fusiformis GN=DSK1 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.234e-12
Identity = 39/106 (36.79%), Postives = 60/106 (56.60%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-IRELREEISNLKQTLEKKEAELEQ 409
            L AL + I AL QKSAH+PYR SKLT +L+D     +KT M   ++P  +A   +++TL++A+R+    +    SN + G+  +    EI   K+ L +  A  EQ
Sbjct:  344 LLALKECIRALGQKSAHVPYRGSKLTLILKDCFSPDSKTTMVATVSPGASAADHSLNTLRYADRIKEQRVS---SNGQRGKAAKASNREIMPSKERLMRIAAATEQ 446          

HSP 2 Score: 25.7942 bits (55), Expect = 3.234e-12
Identity = 17/39 (43.59%), Postives = 21/39 (53.85%), Query Frame = 1
Query:    1 LHLVDLAGSER-VDKSEAVGERLKEAQHINRSPFSSWRC 114
            L LVDLAGSER  D  +   +R  E+  IN S  +   C
Sbjct:  312 LGLVDLAGSERGSDTKQHNSQRRTESADINTSLLALKEC 350          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KINL_LEICH (Kinesin-like protein K39 (Fragment) OS=Leishmania chagasi GN=KIN PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 45/141 (31.91%), Postives = 80/141 (56.74%), Query Frame = 2
Query:   59 KD*KKLNILIDHLSALGDVISALAQKSAHI-----PYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSI-ELGAARSNKESGEIRELREEISNLKQTLEKKE-AELEQLRRGVTRNTSESQKPRA 460
            K+   +N+ +  L  + DV++ +A K A       P+R+SKLT +L+DSLGG++KT M   ++P      ET+STL++A R   I  +     +  +  IREL E++ +++Q +   + A + +L++ +    SE+QK  A
Sbjct:  308 KEATHINLSLTTLGRVIDVLADMATKGAKAQYSVAPFRDSKLTFILKDSLGGNSKTFMIATVSPSALNYEETLSTLRYASRARDIVNVAQVNEDPRARRIRELEEQMEDMRQAMAGGDPAYVSELKKKLALLESEAQKRAA 448          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF24_MOUSE (Kinesin-like protein KIF24 OS=Mus musculus GN=Kif24 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 42/127 (33.07%), Postives = 72/127 (56.69%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELG----AARSNKESGEIRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQKPRAV 463
            L AL + I AL Q+  H P+R SKLTQVL+DS  G+AKT M  +I+P H A   T++TL++A+RV  ++ G    A+ +++         + I +   TL   +   ++++ G+ ++ + +  P  V
Sbjct:  474 LLALKECIRALDQEHTHTPFRQSKLTQVLKDSFIGNAKTCMIANISPSHIATEHTLNTLRYADRVKELKKGVKCCASATSQNQTSANASPKRIQSSPVTLPGDKCSPKKVKLGLQQSLTVAPGPTKV 600          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF24_HUMAN (Kinesin-like protein KIF24 OS=Homo sapiens GN=KIF24 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELG 307
            L AL + I AL Q+  H P+R SKLTQVL+DS  G+AKT M  +I+P H A   T++TL++A+RV  ++ G
Sbjct:  479 LLALKECIRALDQEHTHTPFRQSKLTQVLKDSFIGNAKTCMIANISPSHVATEHTLNTLRYADRVKELKKG 549          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KLP5_SCHPO (Kinesin-like protein 5 OS=Schizosaccharomyces pombe GN=klp5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11
Identity = 43/106 (40.57%), Postives = 65/106 (61.32%), Query Frame = 2
Query:   95 LSALGDVISALAQ--KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARS--------NKESGEIRELREEISNLKQTL 382
            L ALG+ I+AL    + AH+PYR+SKLT++L+ SLGG+ +T+M V ++P      ET +TLK+A R  +I+    R+        ++    I ELRE+IS L+  L
Sbjct:  321 LLALGNCINALCDPHRRAHVPYRDSKLTRLLKFSLGGNCRTVMIVCVSPSSVHYEETHNTLKYANRAKNIKTEVLRNMISVDRHVSQYVKAIVELREQISELENRL 426          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF6_DICDI (Kinesin-related protein 6 OS=Dictyostelium discoideum GN=kif6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11
Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKE 328
            L AL + I AL Q S H P+R S LTQVL+DS  G+++T+M  +I+P  ++   T++TL++A+RV  +    + SNK+
Sbjct:  708 LLALKECIRALDQSSKHTPFRQSTLTQVLKDSFVGNSRTVMIANISPNQSSSEHTLNTLRYADRVKELGTSESNSNKK 785          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KI26B_HUMAN (Kinesin-like protein KIF26B OS=Homo sapiens GN=KIF26B PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 63/202 (31.19%), Postives = 92/202 (45.54%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGG-HAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQKPRA---VSPFHTSESQKS----RAVSPFHTSESQKPRAVS---PFHVPRYGISASLKPGINQPNDDSRSLEPRSTSSGKQRR 667
            LSALG+VI AL   S HIPY+ SKL  +L++SLG  + +T M  HI+    +  ET+ST++ A RV  ++    +    S       EE    + T         QLR   TR T +   P A     P ++S S++S      + P  T+ S K    +   P  VP       + P + +   DSR  E    ++GK  R
Sbjct:  733 LSALGNVILALVNGSKHIPYKESKLAMLLRESLGNMNCRTTMIAHISAAVGSYAETLSTIQIASRVLRMKKKKTKYTSSSSGGESSCEEGRMRRPT---------QLRPFHTRATVDPDFPIAHLSSDPDYSSSSEQSCDTVIYIGPNGTALSDKELTDNEGPPDFVP-------IVPALQKTRGDSRPAEAGEAAAGKSER 918          
The following BLAST results are available for this feature:
BLAST of CF510057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
KIP3_YEAST2.724e-1237.50Kinesin-like protein KIP3 OS=Saccharomyces cerevis... [more]
DSK1_CYLFU3.234e-1236.79Diatom spindle kinesin 1 OS=Cylindrotheca fusiform... [more]
KINL_LEICH3.557e-1231.91Kinesin-like protein K39 (Fragment) OS=Leishmania ... [more]
KIF24_MOUSE3.557e-1233.07Kinesin-like protein KIF24 OS=Mus musculus GN=Kif2... [more]
KIF24_HUMAN1.035e-1149.30Kinesin-like protein KIF24 OS=Homo sapiens GN=KIF2... [more]
KLP5_SCHPO3.011e-1140.57Kinesin-like protein 5 OS=Schizosaccharomyces pomb... [more]
KIF6_DICDI5.136e-1142.31Kinesin-related protein 6 OS=Dictyostelium discoid... [more]
KI26B_HUMAN6.708e-1131.19Kinesin-like protein KIF26B OS=Homo sapiens GN=KIF... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-572 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510057 ID=CF510057; Name=CF510057; organism=Citrus sinensis; type=EST; length=720bp
CTTCATCTGGTGGATTTGGCTGGAAGTGAGAGAGTTGATAAATCAGAAGC
TGTAGGTGAAAGATTAAAAGAAGCTCAACATATTAATAGATCACCTTTCA
GCTCTTGGAGATGTCATTTCTGCTCTTGCCCAAAAGAGTGCACATATTCC
TTACAGAAACAGCAAACTTACTCAAGTATTACAGGATTCTTTAGGTGGGC
ATGCTAAAACATTAATGTTTGTACACATAAATCCTGAACATAATGCTATT
GGAGAGACCATTAGCACACTCAAGTTTGCTGAGAGAGTTTCCTCCATAGA
ACTAGGGGCTGCCCGCTCTAACAAAGAAAGTGGTGAAATCCGAGAACTCA
GAGAAGAGATATCGAATCTTAAACAAACATTGGAGAAAAAGGAAGCAGAA
TTGGAACAACTGAGACGTGGGGTAACAAGAAATACTTCAGAATCTCAAAA
ACCAAGAGCAGTTTCACCTTTTCATACTTCAGAATCTCAAAAATCAAGAG
CAGTTTCACCTTTTCATACTTCAGAATCTCAAAAACCAAGAGCAGTTTCA
CCTTTTCATGTGCCACGATATGGAATTAGTGCTAGCTTGAAGCCTGGGAT
AAATCAGCCAAATGATGACAGTAGAAGCCTTGAGCCTAGAAGCACTTCTT
CAGGTAAGCAAAGGAGGTCAAGGGTTCCTTCTGCATTGACGGACAAAGAG
CCATTGCCAAGATTCCTTTA
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