CF510057

Overview
NameCF510057
Unique NameCF510057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KINH_HUMAN (Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.673e-19
Identity = 48/119 (40.34%), Postives = 72/119 (60.50%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSI--------ELGAARSNKESGEIRELREEISNLKQTLEKKEAELEQLRRGVT 427
            LSALG+VISALA+ S ++PYR+SK+T++LQDSLGG+ +T + +  +P      ET STL F +R  +I        EL A +  K   +  + +E+   L+ T++  E EL + R G T
Sbjct:  258 LSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTIKNTVCVNVELTAEQWKK---KYEKEKEKNKILRNTIQWLENELNRWRNGET 373          

HSP 2 Score: 38.1206 bits (87), Expect = 1.673e-19
Identity = 19/31 (61.29%), Postives = 25/31 (80.65%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+LVDLAGSE+V K+ A G  L EA++IN+S
Sbjct:  227 LYLVDLAGSEKVSKTGAEGAVLDEAKNINKS 257          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KINH_SYNRA (Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.674e-19
Identity = 45/115 (39.13%), Postives = 73/115 (63.48%), Query Frame = 2
Query:   68 KKLNILIDHLSALGDVISALAQ-KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGA-ARSNKESGEIRELREEISNLKQTLEKKEAELE 406
            KK+N     L+ALG VI+AL   KS+H+PYR+SKLT++LQ+SLGG+++T + ++ +P      ET+STL+F  R  SI+  A   ++    E++ L +++ +   T +   A LE
Sbjct:  255 KKIN---KSLTALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNEAETLSTLRFGARAKSIKNKAKVNADLSPAELKALLKKVKSEAVTYQTYIAALE 366          

HSP 2 Score: 39.6614 bits (91), Expect = 1.674e-19
Identity = 19/31 (61.29%), Postives = 26/31 (83.87%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+LVDLAGSE+V K+ A G+ L+EA+ IN+S
Sbjct:  230 LYLVDLAGSEKVGKTGASGQTLEEAKKINKS 260          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF8_DICDI (Kinesin-related protein 8 OS=Dictyostelium discoideum GN=kif8 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.152e-19
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 2
Query:   95 LSALGDVISALAQ------KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSI-ELGAARSNKESGEIRELREEISNLKQTLEK 388
            L ALG+VISAL        K  HIPYR+SKLT++LQ SLGG++KTLM   ++P  +   ET++TLK+A R  +I        +  + +I   + +I  LK+ LEK
Sbjct:  340 LLALGNVISALGDTRRATTKPKHIPYRDSKLTRMLQSSLGGNSKTLMIACVSPADSNFEETLNTLKYAYRARNIMNKPVVNIDPVTQQILTYKTQIQTLKELLEK 444          

HSP 2 Score: 40.4318 bits (93), Expect = 2.152e-19
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 1
Query:    4 HLVDLAGSERVDKSEAVGERLKEAQHIN 87
            H VDLAGSERV K++A G+RLKE  +IN
Sbjct:  310 HFVDLAGSERVKKTKAEGQRLKEGININ 337          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KINH_DROME (Kinesin heavy chain OS=Drosophila melanogaster GN=Khc PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.175e-19
Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   95 LSALGDVISALAQ-KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-----IRELREEISNLKQTLEKKEAELEQLRRGVTRNTSE 442
            LSALG+VISALA     HIPYR+SKLT++LQ+SLGG+A+T + +  +P      ET STL F  R  +++     + + + E       + +E+ + LK  +EK E EL + R G T    E
Sbjct:  265 LSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEE 386          

HSP 2 Score: 38.1206 bits (87), Expect = 2.175e-19
Identity = 19/31 (61.29%), Postives = 25/31 (80.65%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+LVDLAGSE+V K+ A G  L EA++IN+S
Sbjct:  234 LYLVDLAGSEKVSKTGAEGTVLDEAKNINKS 264          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF11_MOUSE (Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.825e-19
Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNK--ESGEIRELREEISNLKQTL----EK-----KEAELEQLRRGVTRNTSESQKPRAVSPFHTSESQKSRAVSPFHTSESQ 532
            L  LG VI+AL +++ HIPYR SKLT++LQDSLGG  +T +   I+P    + ET+STL++A R  +I      + K  +   I+E  EEI  LK+ L    EK      E     +   VT    E Q    V      E + S+A   F  S+++
Sbjct:  291 LLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTRTSIIATISPASFNLEETLSTLEYAHRAKNIMNKPEVNQKLTKKALIKEYTEEIERLKRDLAAAREKNGVYISEESFRAMNGKVT--VQEEQIVELVEKIAVLEEELSKATELFMDSKNE 445          

HSP 2 Score: 37.3502 bits (85), Expect = 2.825e-19
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+LVDLAGSE + +S AV +R +EA +IN+S
Sbjct:  260 LNLVDLAGSENIGRSGAVDKRAREAGNINQS 290          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF3C_PONAB (Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3C PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19
Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 2
Query:   59 KD*KKLNILIDHLSALGDVISALA-QKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE--IRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQKP 454
            K+  K+N+    LSALG+VI+ALA  +S HIPYR+SKLT++LQDSLGG+AKT+M   + P  ++  E++STL+FA R  +I+    R N++  +  +RE +EEI+ LK  LEK+    ++ RR  +R       P
Sbjct:  288 KEASKINL---SLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIK-NKPRVNEDPKDTLLREFQEEIARLKAQLEKRGMLGKRPRRKSSRGKKAVSAP 418          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF3C_HUMAN (Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3C PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.004e-19
Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 2
Query:   59 KD*KKLNILIDHLSALGDVISALA-QKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE--IRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQKP 454
            K+  K+N+    LSALG+VI+ALA  +S HIPYR+SKLT++LQDSLGG+AKT+M   + P  ++  E++STL+FA R  +I+    R N++  +  +RE +EEI+ LK  LEK+    ++ RR  +R       P
Sbjct:  288 KEASKINL---SLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIK-NKPRVNEDPKDTLLREFQEEIARLKAQLEKRGMLGKRPRRKSSRRKKAVSAP 418          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF1A_AEDAE (Kinesin-like protein unc-104 OS=Aedes aegypti GN=unc-104 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.646e-19
Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 2
Query:   95 LSALGDVISALAQ---------KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-IRELREEISNLKQTLEKKEAELEQLRR 418
            L+ LG VISALA+         K+  IPYR+S LT +L+++LGG++KT M   I+P      ET+STL++A+R   I   A  +   + + IREL+EEI  L++ L+ +  E+++  R
Sbjct:  275 LTTLGKVISALAEVASKSKKSKKADFIPYRDSVLTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQIVCKAVVNEDANAKLIRELKEEIQKLRELLKAEGIEVQEGNR 392          

HSP 2 Score: 39.2762 bits (90), Expect = 3.646e-19
Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            + LVDLAGSER D + A G RLKE  +IN+S
Sbjct:  244 ISLVDLAGSERADSTGAKGTRLKEGANINKS 274          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KLP1_CHLRE (Kinesin-like protein KLP1 OS=Chlamydomonas reinhardtii GN=KLP1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.692e-19
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 2
Query:   68 KKLNILIDHLSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHI--NPEHNAIGETISTLKFAERVSSI--ELGAARSNKESGEIRELREEISNLKQTLEKKE 394
            K+   +   LS L   ++AL++K  ++P+R +KLT VL+D+LGG+ KT+M  +I   P HN   ET+STL+FA RV ++  +L    SN  +  +R    +I  LK  L  ++
Sbjct:  259 KEAQFINRSLSFLEQTVNALSRKDTYVPFRQTKLTAVLRDALGGNCKTVMVANIWAEPSHNE--ETLSTLRFASRVRTLTTDLALNESNDPALLLRRYERQIKELKAELAMRD 369          

HSP 2 Score: 42.3578 bits (98), Expect = 3.692e-19
Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+LVDLAGSER  K+   G+ LKEAQ INRS
Sbjct:  237 LNLVDLAGSERTKKTGVTGQTLKEAQFINRS 267          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF4_XENLA (Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.764e-19
Identity = 38/100 (38.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:   95 LSALGDVISAL---AQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIE-LGAARSNKESGEIRELREEISNLKQTL 382
            L  LG+VISAL   ++K   +PYR+SKLT++LQDSLGG++ TLM   ++P  + + ET++TL++A+R   I+      ++ ++ E++ L+ ++  L+  L
Sbjct:  267 LLCLGNVISALGDESKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNMEETLNTLRYADRARKIKNKPIVNTDPQAAELQRLKLQVQELQVLL 366          

HSP 2 Score: 42.3578 bits (98), Expect = 4.764e-19
Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINR 90
            LHLVDLAGSER  K++A G+RLKE   INR
Sbjct:  236 LHLVDLAGSERQKKTKAEGDRLKEGISINR 265          
The following BLAST results are available for this feature:
BLAST of CF510057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
KINH_HUMAN1.673e-1940.34Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=... [more]
KINH_SYNRA1.674e-1939.13Kinesin heavy chain OS=Syncephalastrum racemosum P... [more]
KIF8_DICDI2.152e-1942.86Kinesin-related protein 8 OS=Dictyostelium discoid... [more]
KINH_DROME2.175e-1940.16Kinesin heavy chain OS=Drosophila melanogaster GN=... [more]
KIF11_MOUSE2.825e-1935.67Kinesin-like protein KIF11 OS=Mus musculus GN=Kif1... [more]
KIF3C_PONAB3.004e-1943.70Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3... [more]
KIF3C_HUMAN3.004e-1943.70Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3... [more]
KIF1A_AEDAE3.646e-1938.98Kinesin-like protein unc-104 OS=Aedes aegypti GN=u... [more]
KLP1_CHLRE3.692e-1937.17Kinesin-like protein KLP1 OS=Chlamydomonas reinhar... [more]
KIF4_XENLA4.764e-1938.00Chromosome-associated kinesin KIF4 OS=Xenopus laev... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-572 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510057 ID=CF510057; Name=CF510057; organism=Citrus sinensis; type=EST; length=720bp
CTTCATCTGGTGGATTTGGCTGGAAGTGAGAGAGTTGATAAATCAGAAGC
TGTAGGTGAAAGATTAAAAGAAGCTCAACATATTAATAGATCACCTTTCA
GCTCTTGGAGATGTCATTTCTGCTCTTGCCCAAAAGAGTGCACATATTCC
TTACAGAAACAGCAAACTTACTCAAGTATTACAGGATTCTTTAGGTGGGC
ATGCTAAAACATTAATGTTTGTACACATAAATCCTGAACATAATGCTATT
GGAGAGACCATTAGCACACTCAAGTTTGCTGAGAGAGTTTCCTCCATAGA
ACTAGGGGCTGCCCGCTCTAACAAAGAAAGTGGTGAAATCCGAGAACTCA
GAGAAGAGATATCGAATCTTAAACAAACATTGGAGAAAAAGGAAGCAGAA
TTGGAACAACTGAGACGTGGGGTAACAAGAAATACTTCAGAATCTCAAAA
ACCAAGAGCAGTTTCACCTTTTCATACTTCAGAATCTCAAAAATCAAGAG
CAGTTTCACCTTTTCATACTTCAGAATCTCAAAAACCAAGAGCAGTTTCA
CCTTTTCATGTGCCACGATATGGAATTAGTGCTAGCTTGAAGCCTGGGAT
AAATCAGCCAAATGATGACAGTAGAAGCCTTGAGCCTAGAAGCACTTCTT
CAGGTAAGCAAAGGAGGTCAAGGGTTCCTTCTGCATTGACGGACAAAGAG
CCATTGCCAAGATTCCTTTA
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