CF510057

Overview
NameCF510057
Unique NameCF510057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF1C_MOUSE (Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1c PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.899e-18
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 2
Query:   95 LSALGDVISALA------QKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-IRELREEISNLKQTL 382
            L+ LG VISALA      +KS  IPYR+S LT +L+++LGG+++T M   ++P      ET+STL++A+R   I   A  +   +   IREL+EE++ L+  L
Sbjct:  275 LTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNARLIRELQEEVARLRDLL 377          

HSP 2 Score: 39.6614 bits (91), Expect = 3.899e-18
Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            + LVDLAGSER D S A G RLKE  +IN+S
Sbjct:  244 ISLVDLAGSERADSSGARGMRLKEGANINKS 274          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: ARK2_ORYSJ (Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.914e-18
Identity = 44/119 (36.97%), Postives = 67/119 (56.30%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEIS-NLKQTLEKKEAELEQLRRGVTRNTSESQ 448
            LSALG  I+ALA+ S H+P R+SKLT++L+DS GG A+T + V I P     GET ST+ F +R   +E       KE  + + L   +   L + + + E + +     + R T+E+Q
Sbjct:  333 LSALGKCINALAENSPHVPVRDSKLTRLLKDSFGGTARTSLVVTIGPSPRHRGETTSTIMFGQRAMKVE--NMVKLKEEFDYKSLCRRLDIELDKLIAENERQRKYFDDEIERITAEAQ 449          

HSP 2 Score: 38.891 bits (89), Expect = 3.914e-18
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRSPFSSWRC 114
            L +VDLAGSER+DKS + G  L+EA+ IN S  +  +C
Sbjct:  302 LVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKC 339          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: CIN8_YEAST (Kinesin-like protein CIN8 OS=Saccharomyces cerevisiae GN=CIN8 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 5.078e-18
Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = 2
Query:   68 KKLNILIDHLSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSI---------------------ELGAARSNKESGEIRE----LREEISNLKQTLEKKEAELEQLRRGVTRNTSES 445
            K+   +   L  LG VI+AL  KS HIP+R SKLT++LQDSLGG+ KT +   I+P      ET STL++A +  +I                     EL   +S+  S + +E     ++   NL   LE  + E+++ +R +   TS++
Sbjct:  401 KEAGSINQSLLTLGRVINALVDKSGHIPFRESKLTRLLQDSLGGNTKTALIATISPAKVTSEETCSTLEYASKAKNIKNKPQLGSFIMKDILVKNITMELAKIKSDLLSTKSKEGIYMSQDHYKNLNSDLESYKNEVQECKREIESLTSKN 551          

HSP 2 Score: 37.3502 bits (85), Expect = 5.078e-18
Identity = 17/31 (54.84%), Postives = 25/31 (80.65%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            ++LVDLAGSE +++S A+ +R KEA  IN+S
Sbjct:  379 MNLVDLAGSENINRSGALNQRAKEAGSINQS 409          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: ARK2_ARATH (Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 5.088e-18
Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEIS-NLKQTLEKKEAELEQLRRGVTRNTSESQ 448
            LSALG  I+A+A+ S H+P R+SKLT++L+DS GG A+T + V I P     GET ST+ F +R   +E       KE  + + L +++   L + + + E +L+     V R   ++Q
Sbjct:  335 LSALGKCINAIAENSPHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETTSTILFGQRAMKVE--NMLKIKEEFDYKSLSKKLEVQLDKVIAENERQLKAFDDDVERINRQAQ 451          

HSP 2 Score: 37.7354 bits (86), Expect = 5.088e-18
Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRSPFSSWRC 114
            L LVDLAGSERV KS + G  L+EA+ IN S  +  +C
Sbjct:  304 LVLVDLAGSERVHKSGSEGHMLEEAKSINLSLSALGKC 341          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: BIMC_EMENI (Kinesin-like protein bimC OS=Emericella nidulans GN=bimC PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 6.582e-18
Identity = 53/138 (38.41%), Postives = 75/138 (54.35%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEISNLKQTLEKKEAEL--EQLRRGVTRNTSESQKPRAVSPFHTSESQKSRA 502
            L  LG VI+AL  KS HIPYR SKLT++LQDSLGG  KT +   I+P  + + ETISTL +A R  +I     + N    ++  LRE        +EK +AEL   + R GV  +    ++ +  +      S++ RA
Sbjct:  349 LLTLGRVINALVDKSQHIPYRESKLTRLLQDSLGGRTKTCIIATISPARSNLEETISTLDYAFRAKNIR-NKPQINSTMPKMTLLRE----FTAEIEKLKAELIATRHRNGVYMSVESYEEMKMENESRRIISEEQRA 481          

HSP 2 Score: 33.113 bits (74), Expect = 6.582e-18
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+LVDLAGSE + +S A  +R  EA  IN+S
Sbjct:  318 LNLVDLAGSENIGRSGAENKRATEAGLINKS 348          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KL61_DROME (Bipolar kinesin KRP-130 OS=Drosophila melanogaster GN=Klp61F PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.595e-18
Identity = 43/98 (43.88%), Postives = 62/98 (63.27%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNK--ESGEIRELREEISNLKQTL 382
            L  LG VI+AL  ++ H+PYR SKLT++LQ+SLGG  KT +   I+P H  I ET+STL++A R  +I+     + K  +   ++E  EEI  LK+ L
Sbjct:  289 LLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRDL 386          

HSP 2 Score: 30.4166 bits (67), Expect = 6.595e-18
Identity = 17/32 (53.12%), Postives = 23/32 (71.88%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKS-EAVGERLKEAQHINRS 93
            L+LVDLAGSE V K+    G R++E  +IN+S
Sbjct:  257 LNLVDLAGSENVSKAGNEKGIRVRETVNINQS 288          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KI18B_HUMAN (Kinesin-like protein KIF18B OS=Homo sapiens GN=KIF18B PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.622e-18
Identity = 58/183 (31.69%), Postives = 89/183 (48.63%), Query Frame = 2
Query:   95 LSALGDVISALAQ---KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQKPRAVSPFHTSESQKSRAVSPFHTSESQKPRAVSPFHVPRYGISASLKPGINQPNDDSRSLE 634
            L AL +V++ALA    +  H+PYR+SKLT++L+DSLGG+ +T+M   I+P      +T +TLK+A+R   I L + +SN     +  L   IS      ++ +AE+  LR+ +       Q P    P     S KS    P H      P +  P H P    +  L  G     ++S  +E
Sbjct:  281 LLALINVLNALADAKGRKTHVPYRDSKLTRLLKDSLGGNCRTVMIAAISPSSLTYEDTYNTLKYADRAKEIRL-SLKSN-----VTSLDCHISQYATICQQLQAEVAALRKKLQVYEGGGQPP----PQDLPGSPKS-GPPPEHL-----PSSPLPPHPPSQPCTPELPAGPRALQEESLGME 447          

HSP 2 Score: 39.6614 bits (91), Expect = 6.622e-18
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            + L+DLAGSER   + A GERL+E  +INRS
Sbjct:  250 MSLIDLAGSERASSTHAKGERLREGANINRS 280          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: ATK3_ARATH (Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 2
Query:   68 KKLNILIDHLSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAAR 316
            K+   +   LS+LGDVI ALA+K  H+P+RNSKLT +LQ  LGG AKTLMFV+I PE ++ GE++ +L+FA RV++ E+G  R
Sbjct:  657 KETQAINKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDAKTLMFVNIAPESSSTGESLCSLRFAARVNACEIGTPR 739          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF1C_RAT (Kinesin-like protein KIF1C OS=Rattus norvegicus GN=Kif1c PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.569e-18
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 2
Query:   95 LSALGDVISALA------QKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-IRELREEISNLKQTL 382
            L+ LG VISALA      +KS  IPYR+S LT +L+++LGG+++T M   ++P      ET+STL++A+R   I   A  +   +   IREL+EE++ L++ L
Sbjct:  274 LTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNARLIRELQEEVARLRELL 376          

HSP 2 Score: 37.7354 bits (86), Expect = 8.569e-18
Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            + LV+LAGSER D S A G RLKE  +IN+S
Sbjct:  243 ISLVNLAGSERADSSGARGMRLKEGANINKS 273          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: ARK1_ORYSJ (Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0152900 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 8.592e-18
Identity = 40/121 (33.06%), Postives = 67/121 (55.37%), Query Frame = 2
Query:   95 LSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKE---SGEIRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQ 448
            L++LG  I+ALA+ S HIP R+SKLT++L+DS GG A+T + V I P      ET ST+ F +R   I +   R  +E       +++  E+ +L   +E+++      +  + +   ES+
Sbjct:  332 LTSLGKCINALAENSPHIPTRDSKLTRILRDSFGGTARTSLIVTIGPSSRHFSETSSTIMFGQRAMKI-VNTIRIKEEVDYESLYKKVEHEVDHLTSEMERQQKLKNSEKMQLEKKLKESE 451          

HSP 2 Score: 39.6614 bits (91), Expect = 8.592e-18
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRSPFSSWRC 114
            L +VDLAGSER+DKS + G  ++EA+ IN S  S  +C
Sbjct:  301 LLIVDLAGSERIDKSGSEGHMIEEAKFINLSLTSLGKC 338          
The following BLAST results are available for this feature:
BLAST of CF510057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
KIF1C_MOUSE3.899e-1840.78Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1... [more]
ARK2_ORYSJ3.914e-1836.97Armadillo repeat-containing kinesin-like protein 2... [more]
CIN8_YEAST5.078e-1832.45Kinesin-like protein CIN8 OS=Saccharomyces cerevis... [more]
ARK2_ARATH5.088e-1836.13Armadillo repeat-containing kinesin-like protein 2... [more]
BIMC_EMENI6.582e-1838.41Kinesin-like protein bimC OS=Emericella nidulans G... [more]
KL61_DROME6.595e-1843.88Bipolar kinesin KRP-130 OS=Drosophila melanogaster... [more]
KI18B_HUMAN6.622e-1831.69Kinesin-like protein KIF18B OS=Homo sapiens GN=KIF... [more]
ATK3_ARATH7.400e-1854.22Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=... [more]
KIF1C_RAT8.569e-1840.78Kinesin-like protein KIF1C OS=Rattus norvegicus GN... [more]
ARK1_ORYSJ8.592e-1833.06Armadillo repeat-containing kinesin-like protein 1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-572 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510057 ID=CF510057; Name=CF510057; organism=Citrus sinensis; type=EST; length=720bp
CTTCATCTGGTGGATTTGGCTGGAAGTGAGAGAGTTGATAAATCAGAAGC
TGTAGGTGAAAGATTAAAAGAAGCTCAACATATTAATAGATCACCTTTCA
GCTCTTGGAGATGTCATTTCTGCTCTTGCCCAAAAGAGTGCACATATTCC
TTACAGAAACAGCAAACTTACTCAAGTATTACAGGATTCTTTAGGTGGGC
ATGCTAAAACATTAATGTTTGTACACATAAATCCTGAACATAATGCTATT
GGAGAGACCATTAGCACACTCAAGTTTGCTGAGAGAGTTTCCTCCATAGA
ACTAGGGGCTGCCCGCTCTAACAAAGAAAGTGGTGAAATCCGAGAACTCA
GAGAAGAGATATCGAATCTTAAACAAACATTGGAGAAAAAGGAAGCAGAA
TTGGAACAACTGAGACGTGGGGTAACAAGAAATACTTCAGAATCTCAAAA
ACCAAGAGCAGTTTCACCTTTTCATACTTCAGAATCTCAAAAATCAAGAG
CAGTTTCACCTTTTCATACTTCAGAATCTCAAAAACCAAGAGCAGTTTCA
CCTTTTCATGTGCCACGATATGGAATTAGTGCTAGCTTGAAGCCTGGGAT
AAATCAGCCAAATGATGACAGTAGAAGCCTTGAGCCTAGAAGCACTTCTT
CAGGTAAGCAAAGGAGGTCAAGGGTTCCTTCTGCATTGACGGACAAAGAG
CCATTGCCAAGATTCCTTTA
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