CF510061

Overview
NameCF510061
Unique NameCF510061
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11
Identity = 47/158 (29.75%), Postives = 74/158 (46.84%), Query Frame = 3
Query:   12 NKRKRKAMAATTEADSNRKQLIVSREE---MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            NK K+ A+    E+        +S EE   ++ +F   D +K G I+  EL T L  +GS   E E+ ++ME  D D +G I   EF +          +  + +AF  +D+D +G I+ +EL   +   G+         +I  VD   DG +NFEE
Sbjct:  363 NKLKKLALKVIAES--------LSEEEIKGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDELESAMKEYGMGDEA-SIKEVISEVDTDNDGRINFEE 511          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11
Identity = 46/154 (29.87%), Postives = 73/154 (47.40%), Query Frame = 3
Query:   21 KRKAMAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELN--LVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            K K MA    A +  ++ I   ++M   F   D +  G I+  EL   L  +GS   E E+ ++ME  D D +G I   EF T          +  L +AF  +D+D +G I+ +EL   L+ + +G   ++     +I  VD   DG +N+EE
Sbjct:  369 KLKKMALKVIASNLNEEEIKGLKQM---FTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIKD---IISEVDTDNDGRINYEE 516          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CATR6_PARTE (Caltractin ICL1f OS=Paramecium tetraurelia GN=Icl1f PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11
Identity = 38/130 (29.23%), Postives = 67/130 (51.54%), Query Frame = 3
Query:   90 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            E+++ F+ FD +    I   EL   + S+G   K + + +++ DLDTD  G I  +EF + +    S    +A++++ F+L+D ++ G I+ ++L  V   LG          MI   D+ GD  V FE+
Sbjct:   43 EIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGFITLKDLRKVAKELGETMDDSELQEMIDRADSDGDTQVTFED 172          
BLAST of CF510061 vs. ExPASy Swiss-Prot
Match: CABP4_MOUSE (Calcium-binding protein 4 OS=Mus musculus GN=Cabp4 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.198e-11
Identity = 41/136 (30.15%), Postives = 68/136 (50.00%), Query Frame = 3
Query:   87 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC-----RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDAHGDGNVNFEE 476
            EE+Q  F +FD ++DG I   EL   ++++G    E EL+ V + +     GF+   EF  +        ++   G  ELR AF  +D+D++G I+  EL       LG          M++ +D +GDG ++F+E
Sbjct:  128 EELQAAFEEFDTDQDGYIGYRELGDCMRTLGYMPTEMELLEVSQHVKMRMGGFVDFEEFVELISPKLREETAHMLGVRELRIAFREFDKDRDGRITVAELRQAAPALLGEPLEGTELDEMLREMDLNGDGTIDFDE 263          
The following BLAST results are available for this feature:
BLAST of CF510061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
CDPKL_ARATH8.198e-1129.75Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]
CDPK2_ORYSJ8.198e-1129.87Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CATR6_PARTE8.198e-1129.23Caltractin ICL1f OS=Paramecium tetraurelia GN=Icl1... [more]
CABP4_MOUSE8.198e-1130.15Calcium-binding protein 4 OS=Mus musculus GN=Cabp4... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-576 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510061 ID=CF510061; Name=CF510061; organism=Citrus sinensis; type=EST; length=478bp
CCCCCAAACAGAACAAAAGAAAAAGAAAAGCAATGGCAGCAACAACGGAG
GCAGATTCGAATAGGAAACAGCTAATAGTGAGCCGGGAGGAGATGCAGAA
GATCTTCAACCAGTTCGACGCGAACAAGGACGGCAAGATCTCGCTGACGG
AGCTGGCGACCGTTTTGAAATCAATGGGATCGAGCTACAAAGAGGAGGAG
CTCGTCCGCGTCATGGAGGATCTCGATACCGACAAGGACGGATTCATCAG
CCTGTCGGAGTTCGAAACGATCTGCCGGACCTCCTCTGGTGCCGCCGGCG
AGGCCGAGCTCCGCGAGGCGTTTGATCTCTACGATCAGGACAAGAACGGC
TTGATTTCGGCGGAGGAGTTGAATTTGGTGTTGAACAGGCTCGGAATTAA
GTGCTCGGTTGATGGATGTGTGGCGATGATTAAGCCGGTGGATGCCCATG
GTGATGGCAATGTGAATTTTGAAGAGTT
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