CF510063

Overview
NameCF510063
Unique NameCF510063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length401
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.861e-38
Identity = 72/133 (54.14%), Postives = 98/133 (73.68%), Query Frame = 3
Query:    3 MVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            ++P RV T+++S QH ++++ +++ +++ E +IKP +P   LDEKT++H+ PSGRFV+GGP GDAGLTGRKII+DTY             KD +KVDRS AY  R  AKS+VA GLARRC+VQ+SYAIGV EP
Sbjct:  182 VIPRRVDTIVVSAQHADSISTEDLRSEILEKIIKPTVPAHLLDEKTVYHIQPSGRFVVGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYSKVDRSAAYAARWIAKSLVAAGLARRCLVQLSYAIGVAEP 314          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.861e-38
Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVRV T+++STQH   VT ++I ADLKEHVI+ V+P   +DE+T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSGAY  R  AK+IVA GLA +C VQ++YAIGV +P
Sbjct:  194 PVRVDTIVLSTQHAPEVTLEQIQADLKEHVIEAVVPSALIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSGAYAARYVAKNIVAAGLADKCEVQLAYAIGVAQP 324          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.861e-38
Identity = 75/133 (56.39%), Postives = 94/133 (70.68%), Query Frame = 3
Query:    3 MVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            +VP +V TV++S QH E +T +E+  ++ E +IK  IP KYLDE T+FH+ PSG F+IGGP GDAGLTGRKII+DTY             KD +KVDRS AY+ R  AKS+V  GL RRC+VQ+SYAIGV EP
Sbjct:  191 VVPKKVKTVVVSAQHSEDITTEELRKEILEKIIKTTIPAKYLDEDTVFHIQPSGLFIIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYSKVDRSAAYLARWIAKSLVTAGLVRRCLVQLSYAIGVAEP 323          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.431e-38
Identity = 78/131 (59.54%), Postives = 95/131 (72.52%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVR+ TV+ISTQH   VT ++I +DLKEHVI PV+P + +DE+T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AK+IVA GLA  C VQ++YAIGV +P
Sbjct:  192 PVRIDTVVISTQHAPEVTLEQIQSDLKEHVISPVVPSELIDEQTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADSCEVQLAYAIGVAQP 322          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.175e-38
Identity = 77/133 (57.89%), Postives = 96/133 (72.18%), Query Frame = 3
Query:    3 MVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            +VP+RV TV++S QH   +T +E+  ++ E +IK  IP KYLDEKT++H+ PSG FVIGGP GDAGLTGRKII+DTY             KD +KVDRS AY+ R  AKS+VA GLARR +VQ+SYAIGV EP
Sbjct:  194 VVPLRVDTVVVSAQHAPEITTEELRKEILEKIIKTTIPAKYLDEKTVYHIQPSGLFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFSKVDRSAAYVGRWIAKSLVAAGLARRALVQLSYAIGVAEP 326          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.175e-38
Identity = 76/131 (58.02%), Postives = 93/131 (70.99%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVRV T+++S QH   +T ++I  D+KE VIKPV+P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV  P
Sbjct:  192 PVRVDTIVVSAQHHPEITQEQIQRDIKEQVIKPVVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARP 322          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.175e-38
Identity = 75/131 (57.25%), Postives = 92/131 (70.23%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVR+ T++ISTQH    T + I  DL EHV+ PV+P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA GLA RC +Q++YAIGV +P
Sbjct:  189 PVRIDTIVISTQHHPEATQERIRRDLLEHVVFPVVPSELLDESTRYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNVVAAGLAERCEIQLAYAIGVAQP 319          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_LACSS (S-adenosylmethionine synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metK PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.147e-38
Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            P RV TV+ISTQHDE VT + I  D+ E VIK VIP +YLD+KT + +NP+GRFVIGGP GD+GLTGRKII+DTY             KD TKVDRS +Y  R  AK+IVA GLAR+C VQ++YAIGV +P
Sbjct:  189 PKRVDTVVISTQHDEDVTLETIQKDMLEQVIKTVIPAEYLDDKTKYFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLARKCEVQLAYAIGVAQP 319          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 4.147e-38
Identity = 77/132 (58.33%), Postives = 93/132 (70.45%), Query Frame = 3
Query:    6 VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            VP+RVHTV+ISTQH   ++ +++  +L E VIK VIP   +D  T++HLNP G FV+GGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AKS+V  GL RRC+VQVSYAIGV +P
Sbjct:  184 VPLRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKP 315          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_STRSV (S-adenosylmethionine synthetase OS=Streptococcus sanguinis (strain SK36) GN=metK PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.073e-38
Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVRV TV+ISTQHD   TN+EI  D+ E VIK VIP +YLD+KT F +NP+GRFVIGGP GD+GLTGRKII+DTY             KD TKVDRS +Y  R  AK+IVA GLA++  VQ++YAIGV +P
Sbjct:  190 PVRVDTVVISTQHDPDATNEEIHRDVIEKVIKAVIPAQYLDDKTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAGLAKKAEVQLAYAIGVAQP 320          
The following BLAST results are available for this feature:
BLAST of CF510063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SCHPO1.861e-3854.14S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK_BACSK1.861e-3859.54S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_ASCIM1.861e-3856.39S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK_BACP22.431e-3859.54S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]
METK_NEUCR3.175e-3857.89S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK_GEOKA3.175e-3858.02S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_DESHD3.175e-3857.25S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK_LACSS4.147e-3860.31S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK5_CAEEL4.147e-3858.33Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_STRSV7.073e-3860.31S-adenosylmethionine synthetase OS=Streptococcus s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-578 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510063 ID=CF510063; Name=CF510063; organism=Citrus sinensis; type=EST; length=401bp
CCATGGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGAT
GAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCAT
TAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACC
TTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGT
CTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGGGAGCCCA
TGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTG
GTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTT
GCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCC
A
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