CF510063

Overview
NameCF510063
Unique NameCF510063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length401
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.392e-40
Identity = 80/132 (60.61%), Postives = 96/132 (72.73%), Query Frame = 3
Query:    6 VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP   +D+KTI+HLNP G F+IGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AKS+V +GL RRC+VQVSYAIGV +P
Sbjct:  184 VPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKSGLCRRCLVQVSYAIGVAKP 315          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.392e-40
Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = 3
Query:    3 MVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            ++PVR+HT++IS QH+E +T + +   LKE VIK V+P KYLDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV EP
Sbjct:  196 VIPVRIHTIVISVQHNEDITLEAMQEALKEQVIKAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEP 328          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.431e-40
Identity = 84/133 (63.16%), Postives = 94/133 (70.68%), Query Frame = 3
Query:    3 MVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            ++P+R HTV+IS QH E VTN+EI   L E VIKP IP   LD +TIFHLNPSGRFVIGGP G+AGLTG KIIIDTY             KDP+KVDRS AY  R  AKS+VA GLA R +VQVSYAIGV  P
Sbjct:  184 LIPLRRHTVVISVQHSEDVTNEEIRKRLMEEVIKPSIPAHLLDGETIFHLNPSGRFVIGGPQGEAGLTGGKIIIDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSLVARGLANRALVQVSYAIGVSHP 316          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.557e-40
Identity = 80/132 (60.61%), Postives = 95/132 (71.97%), Query Frame = 3
Query:    6 VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP   +D+KTI+HLNP G F+IGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AKS+V  GL RRC+VQVSYAIGV +P
Sbjct:  184 VPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKP 315          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.557e-40
Identity = 80/133 (60.15%), Postives = 97/133 (72.93%), Query Frame = 3
Query:    3 MVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            ++P+RVHTV+IS QH+E +T +++   LKE VI+ V+P +YLDE TI+HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV EP
Sbjct:  196 VIPMRVHTVVISVQHNEDITLEDMRRALKEQVIRAVVPARYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEP 328          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.289e-39
Identity = 78/131 (59.54%), Postives = 95/131 (72.52%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVRV T++ISTQH   + +D+I  D+KEHVIKP++P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV  P
Sbjct:  192 PVRVDTIVISTQHHPEIEHDQIERDMKEHVIKPIVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARP 322          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.289e-39
Identity = 81/131 (61.83%), Postives = 95/131 (72.52%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVRV TV++STQH   VT+ +I AD+ EHVIKPVIPE  LD+ T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS  Y  R  AK+IVA+GLA++C VQVSYAIGV  P
Sbjct:  188 PVRVDTVVVSTQHSPEVTHAQIEADVIEHVIKPVIPEGMLDKNTKIFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARP 318          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_STACT (S-adenosylmethionine synthetase OS=Staphylococcus carnosus (strain TM300) GN=metK PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.684e-39
Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVR+ T++ISTQH E VT D+I  D+++HVI P++P   LD++T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP
Sbjct:  191 PVRIDTIVISTQHAEDVTLDQIQEDIRKHVIDPIVPASLLDDETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGFARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVAEP 321          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_STAAW (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MW2) GN=metK PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.899e-39
Identity = 77/131 (58.78%), Postives = 96/131 (73.28%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP
Sbjct:  191 PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEP 321          
BLAST of CF510063 vs. ExPASy Swiss-Prot
Match: METK_STAAU (S-adenosylmethionine synthetase OS=Staphylococcus aureus GN=metK PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.899e-39
Identity = 77/131 (58.78%), Postives = 96/131 (73.28%), Query Frame = 3
Query:    9 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEP 401
            PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV EP
Sbjct:  191 PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGIARHGGGCFSGKDPTKVDRSAAYAARYVAKNIVAAGLADQCEVQLAYAIGVAEP 321          
The following BLAST results are available for this feature:
BLAST of CF510063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_CAEEL3.392e-4060.61Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK1_MOUSE3.392e-4060.15S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_ACACA4.431e-4063.16S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK4_CAEEL7.557e-4060.61Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK1_BOVIN7.557e-4060.15S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_GEOTN1.289e-3959.54S-adenosylmethionine synthetase OS=Geobacillus the... [more]
METK_ANATD1.289e-3961.83S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_STACT1.684e-3959.54S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAW4.899e-3958.78S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAU4.899e-3958.78S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-578 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510063 ID=CF510063; Name=CF510063; organism=Citrus sinensis; type=EST; length=401bp
CCATGGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGAT
GAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCAT
TAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACC
TTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGT
CTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGGGAGCCCA
TGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTG
GTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTT
GCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCC
A
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