CF510075

Overview
NameCF510075
Unique NameCF510075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.199e-22
Identity = 51/129 (39.53%), Postives = 78/129 (60.47%), Query Frame = 3
Query:    9 DYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKG-SLYIRPLLVGSGPILGLAPAPEYTF 392
            DY +     +  +++G+L+    + +   S  L+YGQ  FEG+KAYR +DG + LFRP  NA R+Q  A+R+ MP    + F+ A K+   AN+ W+ P G G +LY+RP L+G G  +G+  APE+ F
Sbjct:   17 DYRFIAHWKDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSGATLYLRPFLIGVGENIGVKTAPEFIF 145          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STRCO (Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor GN=ilvE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.084e-21
Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPP-PGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            D+M T+K +    +  G+L  Y  + L P++ VL+Y Q +FEG+KAYR+ DG +  FRP++N  R Q  + R+ MP   +D FI A       +++WVP   G+ SLY+RP ++ +   LG+ PA EY F+
Sbjct:   35 DHMVTIKWTEGRGWHDGQLVPYAPLSLDPATMVLHYAQEIFEGLKAYRRPDGSVATFRPEKNGARFQASSRRLGMPELPVDTFIEACDALVAQDEKWVPAHGGEESLYLRPFMIATEVGLGVRPANEYLFI 165          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_MYCTU (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium tuberculosis GN=ilvE PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 3
Query:   45 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVP-PPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            +   R+  YG IEL PS+ VL+Y Q +FEG+KAYR  DG +V FR D NA RL++ A R+ +P      FI +++Q    +K WVP   G+ +LY+RP +  + P LG+ PA +Y +L
Sbjct:   50 WHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFATEPGLGVRPATQYRYL 167          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_MYCLE (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium leprae GN=ilvE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.304e-20
Identity = 50/114 (43.86%), Postives = 73/114 (64.04%), Query Frame = 3
Query:   57 RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVP-PPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            R+  YG I+L PS+ VL+Y Q +FEG+KAYR  DG +V FRPD NA RL++ A R+ +P    + FI ++ Q    +  WVP   G+ +LY+RP +  + P LG+ PA +Y +L
Sbjct:   54 RVIPYGPIQLDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRPDANAARLRSSARRIAIPELPDELFIDSLCQLIAVDNAWVPRVGGEEALYLRPFIFATEPGLGVRPAKQYRYL 167          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE2_BACSU (Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis GN=ilvK PE=1 SV=5)

HSP 1 Score: 94.7449 bits (234), Expect = 1.493e-19
Identity = 47/130 (36.15%), Postives = 76/130 (58.46%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            D+M+ M  + D  +   R+  Y  + + P++ V +YGQ +FEG+KAY  ED  ++LFRP++N  RL    +R+C+P    +Q +  +KQ    +K W+P     SLYIRP ++ + P LG+A +  Y  L
Sbjct:   31 DHMFVMDYAADKGWYDPRIIPYQPLSMDPAAMVYHYGQTVFEGLKAYVSEDDHVLLFRPEKNMERLNQSNDRLCIPQIDEEQVLEGLKQLVAIDKDWIPNAEGTSLYIRPFIIATEPFLGVAASHTYKLL 160          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STAAR (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.275e-18
Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKG----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM     S DY  +KG    ++  YG IE+SP++  ++YGQ +FEG+KAY+K DG++ LFRPD+N  RL     R+ MP  +  + +  +KQ     + WVP     SLYIRP +  +  +LG+  + +Y  L
Sbjct:   30 DYML----SYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKK-DGEVALFRPDENFKRLNNSLARLEMPQVNEGELLEGLKQLVDLEREWVPEGEGQSLYIRPFVFATEGVLGVGASHQYKLL 158          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT_NEMVE (Branched-chain-amino-acid aminotransferase OS=Nematostella vectensis GN=v1g246094 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.384e-17
Identity = 43/124 (34.68%), Postives = 72/124 (58.06%), Query Frame = 3
Query:    9 DYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA 377
            D+   +K S+ D ++  ++  YG + L P++  L+YG   FEGMKAYR +DG++ +FRP  N  R+   A R C+P+ +  + +  +++     + WVP     SLYIRP ++G+   LG+  A
Sbjct:   73 DHALILKWSDEDGWDNPQIIPYGNLSLPPAASALHYGLECFEGMKAYRGDDGKIRMFRPLMNMKRMNNSAARACLPTFNSGEMVECIRKLIHLEREWVPHSNTCSLYIRPTMIGTQASLGVNKA 196          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STAEQ (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ilvE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.312e-17
Identity = 48/130 (36.92%), Postives = 73/130 (56.15%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM ++    D  +   ++  Y   E+SP++  L+YGQ +FEG+KAY K +G++VLFRPDQN  R+     R+ MP    +  +  +KQ     + WVP     SLYIRP +  +  ILG+  + +Y  L
Sbjct:   30 DYMLSVDYDADQGWHDMKIVPYAPFEISPAAQGLHYGQAVFEGLKAY-KHNGEVVLFRPDQNFKRINNSLARLEMPEVDEEALLEGLKQLVDVERDWVPEGEGQSLYIRPFVFATEGILGVRSSHQYKLL 158          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT_DICDI (Branched-chain-amino-acid aminotransferase OS=Dictyostelium discoideum GN=bcaA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.937e-17
Identity = 43/105 (40.95%), Postives = 67/105 (63.81%), Query Frame = 3
Query:   57 RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKG-SLYIRPLLVGSGPILGL 368
            ++S Y  + + PS+ VL+Y    FEGMKAY+  +G++ LFRPDQN  R    A+R+C+P  + +  I  +K+  + +K W+ P GKG SLY+RP L+ +   LG+
Sbjct:   64 KISGYHNLSIPPSASVLHYALECFEGMKAYKDSNGKIRLFRPDQNMNRFLNSAKRICLPEFNKEAVIELIKKLCVLDKDWI-PEGKGYSLYLRPTLIATQNSLGV 167          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STAES (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.061e-17
Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM ++    D  +   ++  Y   E+SP++  L+YGQ +FEG+KAY K +G++VLFRPDQN  R+     R+ MP    +  +  +KQ     + WVP     SLYIRP +  +  +LG+  + +Y  L
Sbjct:   30 DYMLSVDYDADQGWHDMKIVPYAPFEISPAAQGLHYGQAVFEGLKAY-KHNGEVVLFRPDQNFKRINNSLARLEMPEVDEEALLEGLKQLIDVERDWVPEGEGQSLYIRPFVFATEGVLGVRSSHQYKLL 158          
The following BLAST results are available for this feature:
BLAST of CF510075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ILVE_HAEIN4.199e-2239.53Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE_STRCO2.084e-2138.93Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCTU6.063e-2143.22Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCLE2.304e-2043.86Probable branched-chain-amino-acid aminotransferas... [more]
ILVE2_BACSU1.493e-1936.15Branched-chain-amino-acid aminotransferase 2 OS=Ba... [more]
ILVE_STAAR6.275e-1838.81Probable branched-chain-amino-acid aminotransferas... [more]
BCAT_NEMVE2.384e-1734.68Branched-chain-amino-acid aminotransferase OS=Nema... [more]
ILVE_STAEQ5.312e-1736.92Probable branched-chain-amino-acid aminotransferas... [more]
BCAT_DICDI6.937e-1740.95Branched-chain-amino-acid aminotransferase OS=Dict... [more]
ILVE_STAES9.061e-1736.15Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-590 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510075 ID=CF510075; Name=CF510075; organism=Citrus sinensis; type=EST; length=395bp
CACCAGCGGACTACATGTACACCATGAAATGTTCTAACGACTATTTTGAG
AAAGGACGGCTGAGTCGCTATGGAAAGATTGAGTTGAGCCCTTCTTCAGG
AGTCTTAAATTATGGGCAGGGACTCTTTGAAGGTATGAAAGCATACAGAA
AGGAAGATGGGCAACTTGTTCTCTTCCGTCCTGATCAAAATGCCATCCGC
TTGCAAACTGGTGCCGAGAGAATGTGCATGCCTTCTCCCTCAATTGATCA
ATTCATTGTCGCTGTTAAACAAACTGCTCTTGCCAATAAGCGTTGGGTTC
CTCCTCCTGGGAAAGGGTCTTTGTACATAAGGCCTCTACTTGTCGGAAGT
GGTCCTATATTAGGTTTGGCTCCGGCACCTGAGTACACATTCCTT
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