CF510075

Overview
NameCF510075
Unique NameCF510075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length395
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT2_PONAB (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Pongo abelii GN=BCAT2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.183e-16
Identity = 43/121 (35.54%), Postives = 73/121 (60.33%), Query Frame = 3
Query:    9 DYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLA 371
            D+M  ++ S+  + + R+  +  + L P+S  L+Y   LFEGMKA++ +D Q+ LFRP  N  R+   A R+C+PS    + +  +++    +K WVP     SLY+RP+L+G+ P LG++
Sbjct:   63 DHMLMVEWSDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVS 183          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT_CAEEL (Branched-chain-amino-acid aminotransferase, cytosolic OS=Caenorhabditis elegans GN=bcat-1 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.018e-16
Identity = 48/130 (36.92%), Postives = 74/130 (56.92%), Query Frame = 3
Query:    6 ADYMYTMKCSNDYFEKG----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPE 383
            ADYM T  C  D  E+G    ++   G++++ P + VL+Y   LFEGMKAYR  D ++ +FRP+ N  R++  A R  +P    ++ I  + +    ++ WVP     SLY+RP L+G+ P LG+  A E
Sbjct:   77 ADYMMT--CDWDA-ERGWHHPKIEPIGELKIHPGAKVLHYASELFEGMKAYRGIDNKIRMFRPEMNMARMKRTALRAALPDFDSEEMINVLTELLRLDQEWVPNSDVCSLYLRPTLIGTDPTLGVGCATE 203          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT2_HUMAN (Branched-chain-amino-acid aminotransferase, mitochondrial OS=Homo sapiens GN=BCAT2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.636e-16
Identity = 42/121 (34.71%), Postives = 73/121 (60.33%), Query Frame = 3
Query:    9 DYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLA 371
            D+M  ++ ++  + + R+  +  + L P+S  L+Y   LFEGMKA++ +D Q+ LFRP  N  R+   A R+C+PS    + +  +++    +K WVP     SLY+RP+L+G+ P LG++
Sbjct:   63 DHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVS 183          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STAAW (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16
Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKG----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM     S DY  +KG    ++  YG IE+SP++  ++YGQ +FEG+KAY K DG++ LFRP++N  RL     R+ MP     + +  +KQ     + W+P     SLYIRP +  +   LG+  + +Y  L
Sbjct:   30 DYML----SYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASHQYKLL 158          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STAAS (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MSSA476) GN=ilvE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16
Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKG----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM     S DY  +KG    ++  YG IE+SP++  ++YGQ +FEG+KAY K DG++ LFRP++N  RL     R+ MP     + +  +KQ     + W+P     SLYIRP +  +   LG+  + +Y  L
Sbjct:   30 DYML----SYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASHQYKLL 158          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STAAN (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain N315) GN=ilvE PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16
Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKG----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM     S DY  +KG    ++  YG IE+SP++  ++YGQ +FEG+KAY K DG++ LFRP++N  RL     R+ MP     + +  +KQ     + W+P     SLYIRP +  +   LG+  + +Y  L
Sbjct:   30 DYML----SYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASHQYKLL 158          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STAAM (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ilvE PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16
Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKG----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM     S DY  +KG    ++  YG IE+SP++  ++YGQ +FEG+KAY K DG++ LFRP++N  RL     R+ MP     + +  +KQ     + W+P     SLYIRP +  +   LG+  + +Y  L
Sbjct:   30 DYML----SYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASHQYKLL 158          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: ILVE_STAAC (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain COL) GN=ilvE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16
Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKG----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFL 395
            DYM     S DY  +KG    ++  YG IE+SP++  ++YGQ +FEG+KAY K DG++ LFRP++N  RL     R+ MP     + +  +KQ     + W+P     SLYIRP +  +   LG+  + +Y  L
Sbjct:   30 DYML----SYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAY-KRDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFATEGALGVGASHQYKLL 158          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT1_MOUSE (Branched-chain-amino-acid aminotransferase, cytosolic OS=Mus musculus GN=Bcat1 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 4.497e-16
Identity = 43/121 (35.54%), Postives = 70/121 (57.85%), Query Frame = 3
Query:    9 DYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGL 368
            D+M T++ S+   +EK  +  +G + + P++ VL+Y   LFEG+KA+R  D ++ LFRPD N  R+   A R  +P    ++ +  + Q    ++ WVP     SLYIRP  +G+ P LG+
Sbjct:   55 DHMLTVEWSSASGWEKPHIKPFGNLPIHPAASVLHYAVELFEGLKAFRGVDNKIRLFRPDLNMDRMCRSAVRTTLPMFDKEELLKCILQLLQIDQEWVPYSTSASLYIRPTFIGTEPSLGV 175          
BLAST of CF510075 vs. ExPASy Swiss-Prot
Match: BCAT1_SHEEP (Branched-chain-amino-acid aminotransferase, cytosolic OS=Ovis aries GN=BCAT1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.232e-15
Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 3
Query:    9 DYMYTMKCSNDY-FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIVAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGL 368
            D+M T++ S +  +EK R+     + L P S  L+Y   LFEG+KA+R  D ++ LFRP+ N  R+   A R  +P+    + +  ++Q    ++ WVP     SLYIRP  +G+ P LG+
Sbjct:   54 DHMLTVEWSLELGWEKPRIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFRPNLNMDRMYRSAMRATLPAFDKKELLECIQQLVKLDEEWVPYSTSASLYIRPTFIGTEPSLGV 174          
The following BLAST results are available for this feature:
BLAST of CF510075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
BCAT2_PONAB1.183e-1635.54Branched-chain-amino-acid aminotransferase, mitoch... [more]
BCAT_CAEEL2.018e-1636.92Branched-chain-amino-acid aminotransferase, cytoso... [more]
BCAT2_HUMAN2.636e-1634.71Branched-chain-amino-acid aminotransferase, mitoch... [more]
ILVE_STAAW3.443e-1637.31Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAS3.443e-1637.31Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAN3.443e-1637.31Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAM3.443e-1637.31Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAC3.443e-1637.31Probable branched-chain-amino-acid aminotransferas... [more]
BCAT1_MOUSE4.497e-1635.54Branched-chain-amino-acid aminotransferase, cytoso... [more]
BCAT1_SHEEP2.232e-1535.54Branched-chain-amino-acid aminotransferase, cytoso... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-590 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510075 ID=CF510075; Name=CF510075; organism=Citrus sinensis; type=EST; length=395bp
CACCAGCGGACTACATGTACACCATGAAATGTTCTAACGACTATTTTGAG
AAAGGACGGCTGAGTCGCTATGGAAAGATTGAGTTGAGCCCTTCTTCAGG
AGTCTTAAATTATGGGCAGGGACTCTTTGAAGGTATGAAAGCATACAGAA
AGGAAGATGGGCAACTTGTTCTCTTCCGTCCTGATCAAAATGCCATCCGC
TTGCAAACTGGTGCCGAGAGAATGTGCATGCCTTCTCCCTCAATTGATCA
ATTCATTGTCGCTGTTAAACAAACTGCTCTTGCCAATAAGCGTTGGGTTC
CTCCTCCTGGGAAAGGGTCTTTGTACATAAGGCCTCTACTTGTCGGAAGT
GGTCCTATATTAGGTTTGGCTCCGGCACCTGAGTACACATTCCTT
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