CF510102

Overview
NameCF510102
Unique NameCF510102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: NODQ_RHIME (Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=nodQ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.602e-19
Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W    + +  R  + NQ   V+W TGLSGSGKST+A  +++ L+++GK +Y+LDGDN+RHGLN++LGF+ EDR ENI
Sbjct:  439 NVHWHALEVNKSARSAMKNQLPAVLWFTGLSGSGKSTIANELDRILHAQGKHTYLLDGDNVRHGLNRDLGFTEEDRVENI 518          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_BACP2 (Adenylyl-sulfate kinase OS=Bacillus pumilus (strain SAFR-032) GN=cysC PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 6.144e-19
Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 2
Query:  182 NSTNIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            ++ +I W +S I + E Q+  N K  ++W+TGLSGSGKST+A +  +EL+ +G    +LDGDN+RHGLNK+LGFS +DR ENI
Sbjct:    2 SNEHIVWHDSSITKNEYQQKNNHKSGIIWLTGLSGSGKSTIANAAARELFEQGYQVTVLDGDNVRHGLNKDLGFSDDDRKENI 84          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_SHEAM (Adenylyl-sulfate kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=cysC PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 8.024e-19
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            +I W +  I   ER      +G ++W TGLSG+GKSTLA ++  EL+ RG  SY+LDGDN+RHGL K+LGFS EDR ENI
Sbjct:    3 HIVWHQHAITHSERAAQKGHRGAILWFTGLSGAGKSTLAGALEAELFRRGLHSYLLDGDNVRHGLCKDLGFSLEDRRENI 82          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_ERWT9 (Adenylyl-sulfate kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=cysC PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.048e-18
Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+ R  R+ L   +G V+W TGLSGSGKST+A ++ + L+  G  SY+LDGDN+RHGL ++LGFS +DR ENI
Sbjct:    7 NVVWHAHPVTREAREHLQGHRGAVLWFTGLSGSGKSTVAGALEQALHQLGVSSYLLDGDNVRHGLCRDLGFSDDDRKENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_ENT38 (Adenylyl-sulfate kinase OS=Enterobacter sp. (strain 638) GN=cysC PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.048e-18
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+   +R++L   +G V+W TGLSGSGKST+A ++ + LY +G  +Y+LDGDN+RHGL  +LGFS +DR ENI
Sbjct:    7 NVVWHPHPVTVAQREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALYQQGVSTYLLDGDNVRHGLCSDLGFSDDDRKENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_YERPE (Adenylyl-sulfate kinase OS=Yersinia pestis GN=cysC PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 2
Query:  173 TVGNSTNIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            T  +  NI W    I R +R++    +G V+W TGLSGSGKSTLA ++ + L++RG  +Y+LDGDN+RHGL ++LGFS  DR ENI
Sbjct:   13 TRSDDENIVWHPHAITRQDREQQHGHQGVVLWFTGLSGSGKSTLAGALEQALFARGVSTYLLDGDNVRHGLCRDLGFSDADRRENI 98          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_BACFN (Adenylyl-sulfate kinase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=cysC PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18
Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 2
Query:  221 RLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            R ++++LL Q+G ++W TGLSGSGKST+A ++ +EL+ RG L  ILDGDN+R G+N NLGFS  DR ENI
Sbjct:   17 RQDKEELLKQRGVMIWFTGLSGSGKSTIAIALERELHKRGLLCRILDGDNIRTGINNNLGFSETDRVENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_KLEP7 (Adenylyl-sulfate kinase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=cysC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+ + +R++    +G V+W TGLSGSGKST+A ++ + L+ RG  +Y+LDGDN+RHGL  +LGFS EDR ENI
Sbjct:    7 NVVWHAHPVTQQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHERGVSTYLLDGDNVRHGLCSDLGFSDEDRKENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_KLEP3 (Adenylyl-sulfate kinase OS=Klebsiella pneumoniae (strain 342) GN=cysC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.788e-18
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+ + +R++    +G V+W TGLSGSGKST+A ++ + L+ RG  +Y+LDGDN+RHGL  +LGFS EDR ENI
Sbjct:    7 NVVWHAHPVTQQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHERGVSTYLLDGDNVRHGLCSDLGFSDEDRKENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: PAPS2_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Mus musculus GN=Papss2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18
Identity = 44/86 (51.16%), Postives = 61/86 (70.93%), Query Frame = 2
Query:  185 STNIFWQESPIGRLERQKLLNQKG----CVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            STN+ +Q   + R +R +++  +G    C VW+TGLSG+GK+T++F++ + L S     Y LDGDN+RHGLNKNLGFSA DR ENI
Sbjct:   16 STNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNKNLGFSAGDREENI 101          
The following BLAST results are available for this feature:
BLAST of CF510102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
NODQ_RHIME3.602e-1951.25Bifunctional enzyme nodQ OS=Rhizobium meliloti GN=... [more]
CYSC_BACP26.144e-1951.81Adenylyl-sulfate kinase OS=Bacillus pumilus (strai... [more]
CYSC_SHEAM8.024e-1955.00Adenylyl-sulfate kinase OS=Shewanella amazonensis ... [more]
CYSC_ERWT91.048e-1852.50Adenylyl-sulfate kinase OS=Erwinia tasmaniensis (s... [more]
CYSC_ENT381.048e-1851.25Adenylyl-sulfate kinase OS=Enterobacter sp. (strai... [more]
CYSC_YERPE1.369e-1851.16Adenylyl-sulfate kinase OS=Yersinia pestis GN=cysC... [more]
CYSC_BACFN1.369e-1858.57Adenylyl-sulfate kinase OS=Bacteroides fragilis (s... [more]
CYSC_KLEP71.788e-1851.25Adenylyl-sulfate kinase OS=Klebsiella pneumoniae s... [more]
CYSC_KLEP31.788e-1851.25Adenylyl-sulfate kinase OS=Klebsiella pneumoniae (... [more]
PAPS2_MOUSE2.335e-1851.16Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-617 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510102 ID=CF510102; Name=CF510102; organism=Citrus sinensis; type=EST; length=431bp
CCTTAATGACCAACCCATCGGTTTTATAATCTCTAAATGACAACTTCACT
CCCTCTAGTTTCGGTTTCCATTAACGTAATAAATAAATAGGTCCTCTCTC
TGGCAGTTGCAAACAACCCAGGAAGCTCTAAGAAAAAGGGGGAAGTGAAG
ATATAACATTTTTGTGATGGCTACTGTTGGAAATTCGACTAATATATTTT
GGCAAGAATCTCCAATTGGGAGGCTTGAAAGGCAGAAGCTTCTCAACCAA
AAGGGATGTGTTGTATGGATCACGGGTCTTAGTGGATCGGGGAAAAGTAC
GCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAAAGCTGTCTT
ATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAAAATCTTGGT
TTCAGTGCAGAAGATCGAACTGAGAATATAC
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