CF510102

Overview
NameCF510102
Unique NameCF510102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_GEOSF (Adenylyl-sulfate kinase OS=Geobacter sp. (strain FRC-32) GN=cysC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  182 NSTNIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N  NI W +  + + +  K    +  V+W TGLSGSGKSTLA +V +EL+ +G  +YILDGDN+RHGLN +LGFS  DR ENI
Sbjct:    4 NRLNITWHDRVLTKGDYLKRNGHQPLVLWFTGLSGSGKSTLAHAVEEELFRKGCYTYILDGDNIRHGLNSDLGFSEADRRENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_BACLD (Adenylyl-sulfate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=cysC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            +I W E+ I + E  +    K  ++W+TGLSGSGKST+A +  +EL+++G    +LDGDN+RHGLNK+LGFS EDR ENI
Sbjct:    5 DIVWHEASITKREYHEKNQHKSSIIWLTGLSGSGKSTIANAAARELFAQGYQVTVLDGDNVRHGLNKDLGFSDEDRKENI 84          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_BACA2 (Adenylyl-sulfate kinase OS=Bacillus amyloliquefaciens (strain FZB42) GN=cysC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            +I W E+ I + E Q+    K  ++W+TGLSGSGKST+A +  +EL+ +G    +LDGDN+RHGLNK+LGFS +DR ENI
Sbjct:    5 DIVWHEASITKEEYQQKNKHKSSILWLTGLSGSGKSTIANAAARELFEQGYQVIVLDGDNIRHGLNKDLGFSDDDRKENI 84          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC1_BACSU (Probable adenylyl-sulfate kinase OS=Bacillus subtilis GN=cysC PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.335e-18
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            +I W E+ I + E Q+    K  ++W+TGLSGSGKST+A +  +EL+ +G    +LDGDN+RHGLN++LGFS EDR ENI
Sbjct:    5 DIVWHEASITKEEYQQKNKHKSSILWLTGLSGSGKSTIANAAARELFEQGYQVIVLDGDNIRHGLNRDLGFSDEDRKENI 84          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_SALTY (Adenylyl-sulfate kinase OS=Salmonella typhimurium GN=cysC PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 3.049e-18
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+    R++L   +G V+W TGLSGSGKST+A ++ + L+ RG  +Y+LDGDN+RHGL ++LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_SALTI (Adenylyl-sulfate kinase OS=Salmonella typhi GN=cysC PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 3.049e-18
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+    R++L   +G V+W TGLSGSGKST+A ++ + L+ RG  +Y+LDGDN+RHGL ++LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_SALSV (Adenylyl-sulfate kinase OS=Salmonella schwarzengrund (strain CVM19633) GN=cysC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.049e-18
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+    R++L   +G V+W TGLSGSGKST+A ++ + L+ RG  +Y+LDGDN+RHGL ++LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_SALPB (Adenylyl-sulfate kinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.049e-18
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+    R++L   +G V+W TGLSGSGKST+A ++ + L+ RG  +Y+LDGDN+RHGL ++LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_SALNS (Adenylyl-sulfate kinase OS=Salmonella newport (strain SL254) GN=cysC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.049e-18
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+    R++L   +G V+W TGLSGSGKST+A ++ + L+ RG  +Y+LDGDN+RHGL ++LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_SALHS (Adenylyl-sulfate kinase OS=Salmonella heidelberg (strain SL476) GN=cysC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.049e-18
Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+    R++L   +G V+W TGLSGSGKST+A ++ + L+ RG  +Y+LDGDN+RHGL ++LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENI 86          
The following BLAST results are available for this feature:
BLAST of CF510102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
CYSC_GEOSF2.335e-1853.01Adenylyl-sulfate kinase OS=Geobacter sp. (strain F... [more]
CYSC_BACLD2.335e-1852.50Adenylyl-sulfate kinase OS=Bacillus licheniformis ... [more]
CYSC_BACA22.335e-1852.50Adenylyl-sulfate kinase OS=Bacillus amyloliquefaci... [more]
CYSC1_BACSU2.335e-1852.50Probable adenylyl-sulfate kinase OS=Bacillus subti... [more]
CYSC_SALTY3.049e-1851.25Adenylyl-sulfate kinase OS=Salmonella typhimurium ... [more]
CYSC_SALTI3.049e-1851.25Adenylyl-sulfate kinase OS=Salmonella typhi GN=cys... [more]
CYSC_SALSV3.049e-1851.25Adenylyl-sulfate kinase OS=Salmonella schwarzengru... [more]
CYSC_SALPB3.049e-1851.25Adenylyl-sulfate kinase OS=Salmonella paratyphi B ... [more]
CYSC_SALNS3.049e-1851.25Adenylyl-sulfate kinase OS=Salmonella newport (str... [more]
CYSC_SALHS3.049e-1851.25Adenylyl-sulfate kinase OS=Salmonella heidelberg (... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-617 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510102 ID=CF510102; Name=CF510102; organism=Citrus sinensis; type=EST; length=431bp
CCTTAATGACCAACCCATCGGTTTTATAATCTCTAAATGACAACTTCACT
CCCTCTAGTTTCGGTTTCCATTAACGTAATAAATAAATAGGTCCTCTCTC
TGGCAGTTGCAAACAACCCAGGAAGCTCTAAGAAAAAGGGGGAAGTGAAG
ATATAACATTTTTGTGATGGCTACTGTTGGAAATTCGACTAATATATTTT
GGCAAGAATCTCCAATTGGGAGGCTTGAAAGGCAGAAGCTTCTCAACCAA
AAGGGATGTGTTGTATGGATCACGGGTCTTAGTGGATCGGGGAAAAGTAC
GCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAAAGCTGTCTT
ATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAAAATCTTGGT
TTCAGTGCAGAAGATCGAACTGAGAATATAC
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