CF510102

Overview
NameCF510102
Unique NameCF510102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: PAPS1_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Mus musculus GN=Papss1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  185 STNIFWQESPIGRLERQKLLNQKG----CVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            +TN+ +Q   + R +R +++  +G    C VW+TGLSG+GK+T++ ++ + L   G   Y LDGDN+R GLNKNLGFS EDR EN+
Sbjct:   25 ATNVTYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENV 110          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: PAPS1_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Homo sapiens GN=PAPSS1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  185 STNIFWQESPIGRLERQKLLNQKG----CVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            +TN+ +Q   + R +R +++  +G    C VW+TGLSG+GK+T++ ++ + L   G   Y LDGDN+R GLNKNLGFS EDR EN+
Sbjct:   25 ATNVTYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENV 110          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: KAPS_YEAST (Adenylyl-sulfate kinase OS=Saccharomyces cerevisiae GN=MET14 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16
Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  185 STNIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            +TNI W  + +   ER+ L  Q GC +W+TGLS SGKST+A ++ + L  +   +Y LDGDN+R GLNK+LGFS +DR ENI
Sbjct:    2 ATNITWHPN-LTYDERKALRKQDGCTIWLTGLSASGKSTIACALEQLLLQKNLSAYRLDGDNIRFGLNKDLGFSEKDRNENI 82          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_ESCF3 (Adenylyl-sulfate kinase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=cysC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+   +R++    +G V+W TGLSGSGKST+A ++ + L+  G  +Y+LDGDN+RHGL  +LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTVQQREQHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_ECOL5 (Adenylyl-sulfate kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cysC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+   +R++    +G V+W TGLSGSGKST+A  + + L+  G  +Y+LDGDN+RHGL  +LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTPQQREQHHGHRGVVLWFTGLSGSGKSTVAGGLEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_ACAM1 (Adenylyl-sulfate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=cysC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16
Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 2
Query:  185 STNIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            S+N+ W +S + R  RQ+       ++W TGLSG+GKSTLA +V   L      ++++DGDN+RHGL  +LGFS+EDR ENI
Sbjct:    5 SSNVVWHKSTVTRQNRQEQNGHLSTILWFTGLSGAGKSTLAHTVEDALSKMNCRTFVIDGDNIRHGLCADLGFSSEDRVENI 86          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_VIBPA (Adenylyl-sulfate kinase OS=Vibrio parahaemolyticus GN=cysC PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            NI W +  + +  R +L  QK  V+W TGLSG+GKST+A ++   L   G  +Y+LDGDN+RHGL  +LGFS +DR ENI
Sbjct:   11 NIVWHQHTVDKQFRAELKKQKPAVLWFTGLSGAGKSTVAGALENRLAELGYHTYLLDGDNVRHGLCSDLGFSEQDRRENI 90          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: KAPS_SCHPO (Adenylyl-sulfate kinase OS=Schizosaccharomyces pombe GN=SPAC1782.11 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 2
Query:  185 STNIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            +TNI +    + + ER K +   G  +W+TGLS SGKST+A ++ + L  RG  +Y LDGDN+R GLN +LGFS +DR ENI
Sbjct:    2 ATNITFHPGSVTKEERIKFVGHPGMTIWMTGLSASGKSTIACALEQYLLQRGVTTYRLDGDNVRFGLNSDLGFSEQDRNENI 83          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_VIBCH (Adenylyl-sulfate kinase OS=Vibrio cholerae GN=cysC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W    + + +R  L  Q+  V+W TGLSG+GKST+A ++   L + G  +Y+LDGDN+RHGL  +LGFS +DR ENI
Sbjct:   18 NVVWHRHAVDKAQRATLKQQRPAVLWFTGLSGAGKSTVAGALENRLAALGYHTYLLDGDNVRHGLCSDLGFSEQDRRENI 97          
BLAST of CF510102 vs. ExPASy Swiss-Prot
Match: CYSC_SHISS (Adenylyl-sulfate kinase OS=Shigella sonnei (strain Ss046) GN=cysC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.854e-16
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  191 NIFWQESPIGRLERQKLLNQKGCVVWITGLSGSGKSTLAFSVNKELYSRGKLSYILDGDNLRHGLNKNLGFSAEDRTENI 430
            N+ W   P+   +R+     +G V+W TGLSGSGKST+A ++ + L+  G  +Y+LDGDN+RHGL  +LGFS  DR ENI
Sbjct:    7 NVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENI 86          
The following BLAST results are available for this feature:
BLAST of CF510102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
PAPS1_MOUSE1.281e-1646.51Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_HUMAN1.281e-1646.51Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
KAPS_YEAST1.281e-1651.22Adenylyl-sulfate kinase OS=Saccharomyces cerevisia... [more]
CYSC_ESCF31.281e-1648.75Adenylyl-sulfate kinase OS=Escherichia fergusonii ... [more]
CYSC_ECOL51.281e-1648.75Adenylyl-sulfate kinase OS=Escherichia coli O6:K15... [more]
CYSC_ACAM11.281e-1647.56Adenylyl-sulfate kinase OS=Acaryochloris marina (s... [more]
CYSC_VIBPA2.185e-1650.00Adenylyl-sulfate kinase OS=Vibrio parahaemolyticus... [more]
KAPS_SCHPO2.854e-1648.78Adenylyl-sulfate kinase OS=Schizosaccharomyces pom... [more]
CYSC_VIBCH2.854e-1647.50Adenylyl-sulfate kinase OS=Vibrio cholerae GN=cysC... [more]
CYSC_SHISS2.854e-1648.75Adenylyl-sulfate kinase OS=Shigella sonnei (strain... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-617 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510102 ID=CF510102; Name=CF510102; organism=Citrus sinensis; type=EST; length=431bp
CCTTAATGACCAACCCATCGGTTTTATAATCTCTAAATGACAACTTCACT
CCCTCTAGTTTCGGTTTCCATTAACGTAATAAATAAATAGGTCCTCTCTC
TGGCAGTTGCAAACAACCCAGGAAGCTCTAAGAAAAAGGGGGAAGTGAAG
ATATAACATTTTTGTGATGGCTACTGTTGGAAATTCGACTAATATATTTT
GGCAAGAATCTCCAATTGGGAGGCTTGAAAGGCAGAAGCTTCTCAACCAA
AAGGGATGTGTTGTATGGATCACGGGTCTTAGTGGATCGGGGAAAAGTAC
GCTAGCATTTTCGGTTAACAAGGAACTTTATTCTAGGGGAAAGCTGTCTT
ATATCCTTGACGGAGATAACCTTCGACATGGACTAAACAAAAATCTTGGT
TTCAGTGCAGAAGATCGAACTGAGAATATAC
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