CF510103

Overview
NameCF510103
Unique NameCF510103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length367
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.392e-55
Identity = 103/122 (84.43%), Postives = 109/122 (89.34%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            G+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL RA+ YMVAQCLGAICG G VKAF  + Y R GGGAN +ADGY+ GT LGAEIIGTFVLVYTVFSATDPKRSARDSHV
Sbjct:   70 GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHV 191
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.134e-51
Identity = 98/122 (80.33%), Postives = 104/122 (85.25%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YM+ QCLGAICG G VK FQ + Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSHV
Sbjct:   87 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 208
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 1.481e-51
Identity = 97/122 (79.51%), Postives = 103/122 (84.43%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL YMV QCLGAICG G VK FQK  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHV
Sbjct:   88 GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHV 209
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 1.935e-51
Identity = 98/122 (80.33%), Postives = 103/122 (84.43%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEI+GTFVLVYTVFSATD KRSARDSHV
Sbjct:   87 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHV 208
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.527e-51
Identity = 98/122 (80.33%), Postives = 104/122 (85.25%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ + Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSHV
Sbjct:   86 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHV 207
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.527e-51
Identity = 98/122 (80.33%), Postives = 103/122 (84.43%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHV
Sbjct:   86 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 207
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.527e-51
Identity = 98/122 (80.33%), Postives = 103/122 (84.43%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHV
Sbjct:   86 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 207
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 4.310e-51
Identity = 97/122 (79.51%), Postives = 103/122 (84.43%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHV
Sbjct:   86 GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHV 207
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 7.351e-51
Identity = 97/122 (79.51%), Postives = 104/122 (85.25%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            G LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL L RKVS+IRA++Y+VAQCLG I G G VK   K  YN  GGGAN +A GY+ GT LGAEIIGTFVLVYTVFSATDPKR+ARDSHV
Sbjct:   74 GTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHV 195
[Close]
BLAST of CF510103 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.254e-50
Identity = 97/122 (79.51%), Postives = 102/122 (83.61%), Query Frame = 1 
Query:    1 GILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHV 366
            GI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL YMV QCLGAICG G VK FQ+  Y   GGGAN +  GY KG GLGAEI+GTFVLVYTVFSATD KRSARDSHV
Sbjct:   88 GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHV 209
The following BLAST results are available for this feature:
BLAST of CF510103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PIP28_ARATH8.392e-5584.43Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH1.134e-5180.33Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP12_ORYSJ1.481e-5179.51Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP15_ARATH1.935e-5180.33Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH2.527e-5180.33Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_VICFA2.527e-5180.33Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.527e-5180.33Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ARATH4.310e-5179.51Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP26_ORYSJ7.351e-5179.51Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP15_MAIZE1.254e-5079.51Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-618 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510103 ID=CF510103; Name=CF510103; organism=Citrus sinensis; type=EST; length=367bp
GGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGT
TTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCCGGCTGTGACAT
TCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTAC
ATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGC
TTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAG
CTGATGGATACAACAAGGGCACCGGACTGGGTGCTGAGATCATCGGTACT
TTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATCCTAAGAGGAGCGC
AAGAGACTCCCATGTTC
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